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GEO accession:
Sample GSM73365
Query DataSets for GSM73365
Status
Public on Dec 01, 2005
Title
AML_INV(16)_LIB2
Sample type
SAGE
Anchor
NlaIII
Tag Count
46329
Tag Length
10
Source name
bone marrow, CD15+ myeloid progenitor cells
Organism
Homo sapiens
Characteristics
Acute Myeoloid Leukemia(AML) patient sample with chromosomal inversion INV(16)
Extracted molecule
total RNA
Description
SAGE analysis of gene expression in leukemic myeloid progenitor cells isolated from bone marrow
Submission date
Sep 06, 2005
Last update date
Nov 19, 2008
Contact name
San Ming Wang
E-mail(s)
swang1@northwestern.edu
Phone
224-364-7491
Fax
224-364-5003
Organization name
ENH Research Institute, Northwestern University
Department
Center for Functional Genomics
Street address
1001 University Place
City
Evanston
State/province
IL
ZIP/Postal code
60062
Country
USA
Platform ID
GPL4
Series (1)
GSE3255
Gene Expression Profiles with Common Translocations in Acute Myeloid Leukemia (AML) using SAGE
Data table header descriptions
TAG
Ten-base SAGE tag
COUNT
Absolute tag count
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAGCGGCCG
1294
27930.67
AAGCGGCCGC
937
20224.91
CCTGTAATCC
523
11288.83
GTGAAACCCC
490
10576.53
CCACTGCACT
470
10144.83
CCCATCGTCC
452
9756.31
AAGACAGTGG
370
7986.36
CTAAAGCGGC
318
6863.95
TCTAAAGCGG
317
6842.37
CACCTAATTG
287
6194.82
GTGAAACCCT
272
5871.05
ATTTGAGAAG
257
5547.28
CTCATAAGGA
244
5266.68
TACCTGCAGA
240
5180.34
ATGTAAAAAA
235
5072.42
CTAAGACTTC
188
4057.93
TCAGACGCAG
185
3993.18
GGATTTGGCC
182
3928.42
GCAAGCCAAC
168
3626.24
TAGGTTGTCT
163
3518.31
Total number of rows:
17585
Table truncated, full table size
327 Kbytes
.
Supplementary data files not provided
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