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Sample GSM733697 Query DataSets for GSM733697
Status Public on Jun 02, 2011
Title Bernstein_Osteobl_Control
Sample type SRA
 
Source name Osteobl
Organism Homo sapiens
Characteristics lab: Broad
lab description: Bernstein - Broad Institute
datatype: ChipSeq
datatype description: Chromatin IP Sequencing
cell organism: human
cell description: osteoblasts (NHOst)
cell lineage: mesoderm
cell sex: U
antibody: Input
antibody description: Control signal which may be subtracted from experimental raw signal before peaks are called.
treatment: None
treatment description: No special treatment or protocol applies
control: std
control description: Standard input signal for most experiments.
controlid: wgEncodeEH001056
replicate: 1,2
Biomaterial provider Lonza
Growth protocol Osteoblast_Bernstein_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol For extraction protocol details see: http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
 
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer II
 
Data processing For data processing details see: http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
 
Submission date May 27, 2011
Last update date May 15, 2019
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platform ID GPL9115
Series (1)
GSE29611 Histone Modifications by ChIP-seq from ENCODE/Broad Institute
Relations
SRA SRX067448
BioSample SAMN00622118
Named Annotation GSM733697_hg19_wgEncodeBroadHistoneOsteoblControlStdSig.bigWig

Supplementary file Size Download File type/resource
GSM733697_hg19_wgEncodeBroadHistoneOsteoblControlStdAlnRep1.bam 974.0 Mb (ftp)(http) BAM
GSM733697_hg19_wgEncodeBroadHistoneOsteoblControlStdAlnRep2.bam 1.4 Gb (ftp)(http) BAM
GSM733697_hg19_wgEncodeBroadHistoneOsteoblControlStdSig.bigWig 761.4 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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