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GEO accession:
Sample GSM73370
Query DataSets for GSM73370
Status
Public on Dec 01, 2005
Title
AML_t(8;21)_LIB2
Sample type
SAGE
Anchor
NlaIII
Tag Count
48397
Tag Length
10
Source name
bone marrow, CD15+ myeloid progenitor cells
Organism
Homo sapiens
Characteristics
Acute Myeoloid Leukemia (AML) patient sample with chromosomal translocation t(8;21)
Extracted molecule
total RNA
Description
SAGE analysis of gene expression in leukemic myeloid progenitor cells isolated from bone marrow
Submission date
Sep 06, 2005
Last update date
Nov 19, 2008
Contact name
San Ming Wang
E-mail(s)
swang1@northwestern.edu
Phone
224-364-7491
Fax
224-364-5003
Organization name
ENH Research Institute, Northwestern University
Department
Center for Functional Genomics
Street address
1001 University Place
City
Evanston
State/province
IL
ZIP/Postal code
60062
Country
USA
Platform ID
GPL4
Series (1)
GSE3255
Gene Expression Profiles with Common Translocations in Acute Myeloid Leukemia (AML) using SAGE
Data table header descriptions
TAG
Ten-base SAGE tag
COUNT
Absolute tag count
TPM
tags per million
Data table
TAG
COUNT
TPM
AAGCGGCCGC
3606
74508.75
CCCATCGTCC
1830
37812.26
AAAGCGGCCG
1768
36531.19
TCCAAAGCGG
822
16984.52
CCACTGCACT
565
11674.28
GCAAGCCAAC
496
10248.57
CCCAACGCGC
476
9835.32
CGCCGCCGGC
460
9504.72
TCAAGCGGCC
437
9029.49
CCCGTCCGGA
424
8760.87
GCAGCCATCC
330
6818.60
GCGACGAGGC
312
6446.68
GCTGTTGCGC
305
6302.04
CCCCAGCCAG
297
6136.74
GCAAGAAAGT
259
5351.57
GTGAAACCCC
257
5310.25
GCCGTGTCCG
248
5124.28
AAGCGGGCCG
237
4897.00
GGGCTGGGGT
215
4442.42
AAGCGGCCCG
211
4359.77
Total number of rows:
13939
Table truncated, full table size
260 Kbytes
.
Supplementary data files not provided
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