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GEO accession:
Sample GSM85605
Query DataSets for GSM85605
Status
Public on Jul 14, 2006
Title
BE-3
Sample type
SAGE
Anchor
NlaIII
Tag Count
61701
Tag Length
10
Source name
bronchial epithelium
Organism
Homo sapiens
Characteristics
bronchial epithelium
Extracted molecule
polyA RNA
Description
bronchial brushing
Submission date
Nov 30, 2005
Last update date
Nov 19, 2008
Contact name
Kim Marie Lonergan
E-mail(s)
klonergan@bccrc.ca
Phone
604-675-8111
Fax
604-675-8185
Organization name
British Columbia Cancer Research Centre
Department
Cancer Genetics and Developmental Biology
Lab
Dr. Wan L Lam
Street address
675 West 10th Avenue
City
Vancouver
State/province
British Columbia
ZIP/Postal code
V5Z 1L3
Country
Canada
Platform ID
GPL4
Series (2)
GSE3707
Expression profiling of bronchial epithelium
GSE3754
Identification of novel lung genes in bronchial epithelium by serial analysis of gene expression
Data table header descriptions
TAG
10 nucleotide unique SAGE tag sequence
COUNT
raw tag count
TPM
tags per million
Data table
TAG
COUNT
TPM
CTTTGAGTCC
3275
53078.56
ACTTTTTCAA
862
13970.60
TCTCCATACC
399
6466.67
CACCTAATTG
365
5915.63
TTCATACACC
322
5218.72
CCCATCGTCC
318
5153.89
GTTGTGGTTA
311
5040.44
TAGGTTGTCT
264
4278.70
AAAAAAAAAA
259
4197.66
TTGGTCCTCT
253
4100.42
TTCAATAAAA
241
3905.93
AGCCCTACAA
237
3841.10
AAGCTCGCCG
228
3695.24
ATAATTCTTT
216
3500.75
GAGGGAGTTT
216
3500.75
CTGTACAGAC
211
3419.72
CCACTGCACT
211
3419.72
GTGAAACCCC
210
3403.51
CCTATCAGTA
207
3354.89
TGTGGGAAAT
175
2836.26
Total number of rows:
20935
Table truncated, full table size
390 Kbytes
.
Supplementary data files not provided
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