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GEO accession:
Sample GSM85614
Query DataSets for GSM85614
Status
Public on Jul 14, 2006
Title
BE-10
Sample type
SAGE
Anchor
NlaIII
Tag Count
86725
Tag Length
10
Source name
bronchial epithelium
Organism
Homo sapiens
Characteristics
bronchial epithelium
Extracted molecule
polyA RNA
Description
bronchial brushing
Submission date
Nov 30, 2005
Last update date
Nov 19, 2008
Contact name
Kim Marie Lonergan
E-mail(s)
klonergan@bccrc.ca
Phone
604-675-8111
Fax
604-675-8185
Organization name
British Columbia Cancer Research Centre
Department
Cancer Genetics and Developmental Biology
Lab
Dr. Wan L Lam
Street address
675 West 10th Avenue
City
Vancouver
State/province
British Columbia
ZIP/Postal code
V5Z 1L3
Country
Canada
Platform ID
GPL4
Series (2)
GSE3707
Expression profiling of bronchial epithelium
GSE3754
Identification of novel lung genes in bronchial epithelium by serial analysis of gene expression
Data table header descriptions
TAG
10 nucleotide unique SAGE tag sequence
COUNT
raw tag count
TPM
tags per million
Data table
TAG
COUNT
TPM
CTTTGAGTCC
3187
36748.34
CACCTAATTG
497
5730.76
TGTGTTGAGA
478
5511.67
TAATAAAGGT
446
5142.69
ATAATTCTTT
424
4889.02
GTTGTGGTTA
401
4623.81
ACTTTTTCAA
391
4508.50
CCCATCGTCC
358
4127.99
TTCATACACC
343
3955.03
CCAAGGTGGC
337
3885.85
CCTATCAGTA
335
3862.78
TTGGGGTTTC
313
3609.11
TTCAATAAAA
313
3609.11
AAAAAAAAAA
289
3332.37
GTTCACATTA
271
3124.82
GCATAATAGG
267
3078.70
CTGACCAGAG
257
2963.39
CTAAGACTTC
249
2871.14
TAGGTTGTCT
247
2848.08
TGTGGGAAAT
246
2836.55
Total number of rows:
26843
Table truncated, full table size
500 Kbytes
.
Supplementary data files not provided
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