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GEO accession:
Sample GSM85616
Query DataSets for GSM85616
Status
Public on Jul 14, 2006
Title
BE-11B
Sample type
SAGE
Anchor
NlaIII
Tag Count
92950
Tag Length
10
Source name
bronchial epithelium
Organism
Homo sapiens
Characteristics
bronchial epithelium
Extracted molecule
polyA RNA
Description
bronchial brushing
Submission date
Nov 30, 2005
Last update date
Nov 19, 2008
Contact name
Kim Marie Lonergan
E-mail(s)
klonergan@bccrc.ca
Phone
604-675-8111
Fax
604-675-8185
Organization name
British Columbia Cancer Research Centre
Department
Cancer Genetics and Developmental Biology
Lab
Dr. Wan L Lam
Street address
675 West 10th Avenue
City
Vancouver
State/province
British Columbia
ZIP/Postal code
V5Z 1L3
Country
Canada
Platform ID
GPL4
Series (2)
GSE3707
Expression profiling of bronchial epithelium
GSE3754
Identification of novel lung genes in bronchial epithelium by serial analysis of gene expression
Data table header descriptions
TAG
10 nucleotide unique SAGE tag sequence
COUNT
raw tag count
TPM
tags per million
Data table
TAG
COUNT
TPM
CTTTGAGTCC
7235
77837.55
ACTTTTTCAA
1470
15814.95
GTTGTGGTTA
809
8703.60
TTCATACACC
610
6562.67
CCTATCAGTA
610
6562.67
AAAAAAAAAA
606
6519.63
CACCTAATTG
503
5411.51
GTTCACATTA
502
5400.75
AAGCTCGCCG
499
5368.48
CCCATCGTCC
394
4238.84
TAGGTTGTCT
393
4228.08
AGCCCTACAA
381
4098.98
CCACTGCACT
306
3292.09
AGCTTAATGA
304
3270.58
TGCCCTCAGG
304
3270.58
TTCAATAAAA
295
3173.75
GTGAAACCCC
294
3162.99
CCTGTAATCC
262
2818.72
ACTAACACCC
261
2807.96
GCAGCGGCAG
258
2775.69
Total number of rows:
27719
Table truncated, full table size
516 Kbytes
.
Supplementary data files not provided
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