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GEO accession:
Sample GSM85618
Query DataSets for GSM85618
Status
Public on Jul 14, 2006
Title
BE-13
Sample type
SAGE
Anchor
NlaIII
Tag Count
91425
Tag Length
10
Source name
bronchial epithelium
Organism
Homo sapiens
Characteristics
bronchial epithelium
Extracted molecule
polyA RNA
Description
bronchial brushing
Submission date
Nov 30, 2005
Last update date
Nov 19, 2008
Contact name
Kim Marie Lonergan
E-mail(s)
klonergan@bccrc.ca
Phone
604-675-8111
Fax
604-675-8185
Organization name
British Columbia Cancer Research Centre
Department
Cancer Genetics and Developmental Biology
Lab
Dr. Wan L Lam
Street address
675 West 10th Avenue
City
Vancouver
State/province
British Columbia
ZIP/Postal code
V5Z 1L3
Country
Canada
Platform ID
GPL4
Series (2)
GSE3707
Expression profiling of bronchial epithelium
GSE3754
Identification of novel lung genes in bronchial epithelium by serial analysis of gene expression
Data table header descriptions
TAG
10 nucleotide unique SAGE tag sequence
COUNT
raw tag count
TPM
tags per million
Data table
TAG
COUNT
TPM
CCTATCAGTA
2164
23669.67
CTTTGAGTCC
613
6704.95
ACTTTTTCAA
585
6398.69
CACCTAATTG
500
5468.96
TGTGTTGAGA
487
5326.77
GTTGTGGTTA
464
5075.20
ATAATTCTTT
456
4987.69
CTAAGACTTC
441
4823.63
CCAAGGTGGC
440
4812.69
TTCATACACC
437
4779.87
CCCATCGTCC
426
4659.56
TTGGGGTTTC
425
4648.62
GTGATCAGCT
423
4626.74
TAATAAAGGT
423
4626.74
TAGGTTGTCT
406
4440.80
AAAAAAAAAA
353
3861.09
TTCAATAAAA
325
3554.83
CTCCACCCGA
311
3401.70
TTGGTCCTCT
290
3172.00
TGATTTCACT
290
3172.00
Total number of rows:
26327
Table truncated, full table size
491 Kbytes
.
Supplementary data files not provided
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