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GEO accession:
Sample GSM85619
Query DataSets for GSM85619
Status
Public on Jul 14, 2006
Title
BE-14
Sample type
SAGE
Anchor
NlaIII
Tag Count
155462
Tag Length
10
Source name
bronchial epithelium
Organism
Homo sapiens
Characteristics
bronchial epithelium
Extracted molecule
polyA RNA
Description
bronchial brushing
Submission date
Nov 30, 2005
Last update date
Nov 19, 2008
Contact name
Kim Marie Lonergan
E-mail(s)
klonergan@bccrc.ca
Phone
604-675-8111
Fax
604-675-8185
Organization name
British Columbia Cancer Research Centre
Department
Cancer Genetics and Developmental Biology
Lab
Dr. Wan L Lam
Street address
675 West 10th Avenue
City
Vancouver
State/province
British Columbia
ZIP/Postal code
V5Z 1L3
Country
Canada
Platform ID
GPL4
Series (2)
GSE3707
Expression profiling of bronchial epithelium
GSE3754
Identification of novel lung genes in bronchial epithelium by serial analysis of gene expression
Data table header descriptions
TAG
10 nucleotide unique SAGE tag sequence
COUNT
raw tag count
TPM
tags per million
Data table
TAG
COUNT
TPM
CTTTGAGTCC
5431
34934.58
ACTTTTTCAA
1583
10182.55
CCTATCAGTA
1312
8439.36
GTTGTGGTTA
1245
8008.39
TTCATACACC
935
6014.33
CACCTAATTG
915
5885.68
GTTCACATTA
828
5326.06
AAAAAAAAAA
805
5178.11
TAGGTTGTCT
785
5049.47
TTCAATAAAA
689
4431.95
CCCATCGTCC
637
4097.46
GTGAAACCCC
572
3679.36
ATAATTCTTT
550
3537.84
TCAGATCTTT
529
3402.76
AAGCTCGCCG
522
3357.73
TTGGTCCTCT
498
3203.36
AGCCCTACAA
466
2997.52
TGTGTTGAGA
455
2926.76
TGCCCTCAGG
432
2778.81
CCAAGGTGGC
422
2714.49
Total number of rows:
38184
Table truncated, full table size
687 Kbytes
.
Supplementary data files not provided
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