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GEO accession:
Sample GSM85623
Query DataSets for GSM85623
Status
Public on Nov 21, 2006
Title
NLP-2
Sample type
SAGE
Anchor
NlaIII
Tag Count
64434
Tag Length
10
Source name
lung parenchyma
Organism
Homo sapiens
Characteristics
lung parenchyma pooled from 4 individuals
Extracted molecule
polyA RNA
Description
lung parenchyma pooled from 4 individuals
Submission date
Nov 30, 2005
Last update date
Nov 19, 2008
Contact name
Kim Marie Lonergan
E-mail(s)
klonergan@bccrc.ca
Phone
604-675-8111
Fax
604-675-8185
Organization name
British Columbia Cancer Research Centre
Department
Cancer Genetics and Developmental Biology
Lab
Dr. Wan L Lam
Street address
675 West 10th Avenue
City
Vancouver
State/province
British Columbia
ZIP/Postal code
V5Z 1L3
Country
Canada
Platform ID
GPL4
Series (2)
GSE3708
Expression profiling of normal lung parenchyma
GSE3754
Identification of novel lung genes in bronchial epithelium by serial analysis of gene expression
Data table header descriptions
TAG
10 nucleotide unique SAGE tag sequence
COUNT
raw tag count
TPM
tags per million
Data table
TAG
COUNT
TPM
CTCCCAGCCA
1278
19834.25
GTTCACATTA
793
12307.17
GCCGTGAACA
707
10972.47
ACTTTTTCAA
457
7092.53
TTCATACACC
451
6999.41
TAGGTTGTCT
439
6813.17
CCCATCGTCC
431
6689.02
CCACTGCACT
398
6176.86
CACCTAATTG
389
6037.19
GTTGTGGTTA
387
6006.15
ATAATTCTTT
355
5509.51
TTGGGGTTTC
355
5509.51
GAAATAAAGC
349
5416.40
GCCGTGAGCA
346
5369.84
AGCCCTACAA
279
4330.01
TTCAATAAAA
277
4298.97
GAAATACAGT
268
4159.29
GTGAAACCCC
265
4112.74
TTGGTGAAGG
262
4066.18
CTGGGTTAAT
259
4019.62
Total number of rows:
20003
Table truncated, full table size
373 Kbytes
.
Supplementary data files not provided
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