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GEO accession:
Sample GSM874209
Query DataSets for GSM874209
Status
Public on Feb 22, 2012
Title
G11
Sample type
SAGE
Anchor
NlaIII
Tag Count
5402742
Tag Length
17
Source name
Guy11-Tag_counts
Organism
Pyricularia grisea
Characteristics
strain: G11 (Guy11)
genotype/variation: Wild-Type
incubation time: 3 days
incubation temperature: 28℃
rotation speed: 180r/min
Extracted molecule
genomic DNA
Extraction protocol
Liquid nitrogen grinding method
Data processing
Data analyzed with CLCGenomicsWorkbench_3_6_5 software.
Submission date
Feb 12, 2012
Last update date
Feb 22, 2012
Contact name
liu xiaoguang
E-mail(s)
fengyuntwins2@163.com
Phone
13819479661
Organization name
Zhejiang University
Street address
yuhang road
City
hangzhou
ZIP/Postal code
310058
Country
China
Platform ID
GPL15220
Series (1)
GSE35840
Digital gene expression tag profiling of M. grisea G11 and T146
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAAAAAAAAA
13585
2514.46
AAAAAAAAAAAAAAAAT
9949
1841.47
AAAAAAAAAAAAAAACA
16
2.96
AAAAAAAAAAAAAAACT
14
2.59
AAAAAAAAAAAAAAAGA
26
4.81
AAAAAAAAAAAAAAATT
4060
751.47
AAAAAAAAAAAAAACAA
17
3.15
AAAAAAAAAAAAAAGAA
40
7.40
AAAAAAAAAAAAAAGAT
8
1.48
AAAAAAAAAAAAAATAA
20
3.70
AAAAAAAAAAAAAATTA
751
139.00
AAAAAAAAAAAAACAAA
31
5.74
AAAAAAAAAAAAAGAAA
26
4.81
AAAAAAAAAAAAAGAAT
13
2.41
AAAAAAAAAAAAAGTTA
3
0.56
AAAAAAAAAAAAATAAA
24
4.44
AAAAAAAAAAAAATCAA
2
0.37
AAAAAAAAAAAAATTAG
77
14.25
AAAAAAAAAAAACAAAA
42
7.77
AAAAAAAAAAAAGAAAA
49
9.07
Total number of rows:
87510
Table truncated, full table size
2181 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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