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GEO accession:
Sample GSM874210
Query DataSets for GSM874210
Status
Public on Feb 22, 2012
Title
T146
Sample type
SAGE
Anchor
NlaIII
Tag Count
6032864
Tag Length
17
Source name
T146- Tag_counts
Organism
Pyricularia grisea
Characteristics
strain: T146
genotype/variation: temperature sensitive mutant
incubation time: 3 days
incubation temperature: 28℃
rotation speed: 180r/min
Extracted molecule
genomic DNA
Extraction protocol
Liquid nitrogen grinding method
Data processing
Data analyzed with CLCGenomicsWorkbench_3_6_5 software.
Submission date
Feb 12, 2012
Last update date
Feb 22, 2012
Contact name
liu xiaoguang
E-mail(s)
fengyuntwins2@163.com
Phone
13819479661
Organization name
Zhejiang University
Street address
yuhang road
City
hangzhou
ZIP/Postal code
310058
Country
China
Platform ID
GPL15220
Series (1)
GSE35840
Digital gene expression tag profiling of M. grisea G11 and T146
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAAAAAAAAA
4653
771.28
AAAAAAAAAAAAAAAAG
15
2.49
AAAAAAAAAAAAAAAGA
4
0.66
AAAAAAAAAAAAAAATA
6
0.99
AAAAAAAAAAAAAACAA
5
0.83
AAAAAAAAAAAAAAGAA
16
2.65
AAAAAAAAAAAAAATAA
3
0.50
AAAAAAAAAAAAACAAA
3
0.50
AAAAAAAAAAAAAGAAA
25
4.14
AAAAAAAAAAAAATAAA
8
1.33
AAAAAAAAAAAACAAAA
12
1.99
AAAAAAAAAAAAGAAAA
22
3.65
AAAAAAAAAAAATAAAA
13
2.15
AAAAAAAAAAAATGAAA
6
0.99
AAAAAAAAAAACAAAAA
13
2.15
AAAAAAAAAAAGAAAAA
28
4.64
AAAAAAAAAAATAAAAA
10
1.66
AAAAAAAAAAATTAAAA
1
0.17
AAAAAAAAAACAAAAAA
11
1.82
AAAAAAAAAACCAAACC
3
0.50
Total number of rows:
82297
Table truncated, full table size
2050 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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