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GEO accession:
Sample GSM936083
Query DataSets for GSM936083
Status
Public on May 24, 2012
Title
Broad_Combined_H1-hESC
Sample type
SRA
Source name
H1-hESC
Organism
Homo sapiens
Characteristics
lab: Broad
lab description: Bernstein - Broad Institute
datatype: Combined
datatype description: Multi-assay Synthesis
cell: H1-hESC
cell organism: human
cell description: embryonic stem cells
cell karyotype: normal
cell lineage: inner cell mass
cell sex: M
softwareversion: ChromHMM_ENCODEDynamicsPaper
Biomaterial provider
WiCell Research Institute
Growth protocol
H1_ES_protocol.pdf
Extracted molecule
genomic DNA
Extraction protocol
Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see
http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHmm
Library strategy
ChIP-Seq
Library source
genomic
Library selection
ChIP
Instrument model
Illumina Genome Analyzer
Data processing
http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHmm
Submission date
May 23, 2012
Last update date
May 15, 2019
Contact name
ENCODE DCC
E-mail(s)
encode-help@lists.stanford.edu
Organization name
ENCODE DCC
Street address
300 Pasteur Dr
City
Stanford
State/province
CA
ZIP/Postal code
94305-5120
Country
USA
Platform ID
GPL9052
Series (1)
GSE38163
Chromatin State Segmentation by HMM from ENCODE/Broad
Relations
Reanalysis of
GSM733657
Reanalysis of
GSM733670
Reanalysis of
GSM733672
Reanalysis of
GSM733687
Reanalysis of
GSM733718
Reanalysis of
GSM733725
Reanalysis of
GSM733748
Reanalysis of
GSM733770
Reanalysis of
GSM733773
Reanalysis of
GSM733782
BioSample
SAMN02197568
Named Annotation
GSM936083_hg19_wgEncodeBroadHmmH1hescHMM.bed.gz
SRA
SRX067408
SRA
SRX067421
SRA
SRX067423
SRA
SRX067438
SRA
SRX067469
SRA
SRX067476
SRA
SRX067499
SRA
SRX067521
SRA
SRX067524
SRA
SRX067533
Supplementary file
Size
Download
File type/resource
GSM936083_hg19_wgEncodeBroadHmmH1hescHMM.bed.gz
5.7 Mb
(ftp)
(http)
BED
SRA Run Selector
Raw data are available in SRA
Processed data provided as supplementary file
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