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Items: 1 to 20 of 82

1.

RNA Subcellular CAGE Localization from ENCODE/RIKEN

(Submitter supplied) This data was generated by ENCODE. If you have questions about the data, contact the submitting laboratory directly (Piero Carninci mailto:carninci@riken.jp). If you have questions about the Genome Browser track associated with this data, contact ENCODE (mailto:genome@soe.ucsc.edu). This track shows 5' cap analysis gene expression (CAGE) tags and clusters in RNA extracts (http://hgwdev.cse.ucsc.edu/cgi-bin/hgEncodeVocab?type=rnaExtract) from different sub-cellular localizations (http://hgwdev.cse.ucsc.edu/cgi-bin/hgEncodeVocab?type=localization) in multiple cell lines (http://hgwdev.cse.ucsc.edu/cgi-bin/hgEncodeVocab?type=cellType). more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL9052 GPL10999 GPL11154
78 Samples
Download data: BED, BEDRNAELEMENTS, BIGWIG, GTF, TXT
Series
Accession:
GSE34448
ID:
200034448

PubMed Full text in PMC Similar studies ENCODESRA Run Selector

2.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10400 Series
180082 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

3.

Illumina Genome Analyzer IIx (Homo sapiens)

Organism:
Homo sapiens
1096 Series
9927 Samples
Download data
Platform
Accession:
GPL10999
ID:
100010999

4.

Illumina Genome Analyzer (Homo sapiens)

Organism:
Homo sapiens
586 Series
7896 Samples
Download data
Platform
Accession:
GPL9052
ID:
100009052

5.

RIKEN_Cage_HUVEC_nucleus_longNonPolyA

Organism:
Homo sapiens
Source name:
HUVEC
Platform:
GPL10999
Series:
GSE34448
Download data: BEDRNAELEMENTS, BIGWIG
Sample
Accession:
GSM979644
ID:
300979644

SRA Run Selector

6.

RIKEN_Cage_HeLa-S3_nucleus_longNonPolyA

Organism:
Homo sapiens
Source name:
HeLa-S3
Platform:
GPL10999
Series:
GSE34448
Download data: BEDRNAELEMENTS, BIGWIG
Sample
Accession:
GSM979631
ID:
300979631

SRA Run Selector

7.

RIKEN_Cage_NHEM.f_M2_cell_longPolyA

Organism:
Homo sapiens
Source name:
NHEM.f_M2
Platform:
GPL11154
Series:
GSE34448
Download data: BEDRNAELEMENTS, BIGWIG
Sample
Accession:
GSM979663
ID:
300979663

SRA Run Selector

8.

RIKEN_Cage_NHDF_cell_longPolyA

Organism:
Homo sapiens
Source name:
NHDF
Platform:
GPL11154
Series:
GSE34448
Download data: BEDRNAELEMENTS, BIGWIG
Sample
Accession:
GSM979662
ID:
300979662

SRA Run Selector

9.

RIKEN_Cage_HWP_cell_longPolyA

Organism:
Homo sapiens
Source name:
HWP
Platform:
GPL11154
Series:
GSE34448
Download data: BEDRNAELEMENTS, BIGWIG
Sample
Accession:
GSM979661
ID:
300979661

SRA Run Selector

10.

RIKEN_Cage_HVMF_cell_longPolyA

Organism:
Homo sapiens
Source name:
HVMF
Platform:
GPL11154
Series:
GSE34448
Download data: BEDRNAELEMENTS, BIGWIG
Sample
Accession:
GSM979660
ID:
300979660

SRA Run Selector

11.

RIKEN_Cage_IMR90_nucleus_longPolyA

Organism:
Homo sapiens
Source name:
IMR90
Platform:
GPL11154
Series:
GSE34448
Download data: BEDRNAELEMENTS, BIGWIG
Sample
Accession:
GSM979659
ID:
300979659

SRA Run Selector

12.

RIKEN_Cage_IMR90_cytosol_longPolyA

Organism:
Homo sapiens
Source name:
IMR90
Platform:
GPL11154
Series:
GSE34448
Download data: BEDRNAELEMENTS, BIGWIG
Sample
Accession:
GSM979658
ID:
300979658

SRA Run Selector

13.

RIKEN_Cage_MCF-7_cytosol_longPolyA

Organism:
Homo sapiens
Source name:
MCF-7
Platform:
GPL11154
Series:
GSE34448
Download data: BEDRNAELEMENTS, BIGWIG
Sample
Accession:
GSM979657
ID:
300979657

SRA Run Selector

14.

RIKEN_Cage_IMR90_cell_longPolyA

Organism:
Homo sapiens
Source name:
IMR90
Platform:
GPL11154
Series:
GSE34448
Download data: BEDRNAELEMENTS, BIGWIG
Sample
Accession:
GSM979656
ID:
300979656

SRA Run Selector

15.

RIKEN_Cage_Monocytes-CD14+_cell_longPolyA

Organism:
Homo sapiens
Source name:
Monocytes-CD14+
Platform:
GPL11154
Series:
GSE34448
Download data: BEDRNAELEMENTS, BIGWIG
Sample
Accession:
GSM979655
ID:
300979655

SRA Run Selector

16.

RIKEN_Cage_MCF-7_nucleus_longPolyA

Organism:
Homo sapiens
Source name:
MCF-7
Platform:
GPL11154
Series:
GSE34448
Download data: BEDRNAELEMENTS, BIGWIG
Sample
Accession:
GSM979654
ID:
300979654

SRA Run Selector

17.

RIKEN_Cage_SkMC_cell_longPolyA

Organism:
Homo sapiens
Source name:
SkMC
Platform:
GPL11154
Series:
GSE34448
Download data: BEDRNAELEMENTS, BIGWIG
Sample
Accession:
GSM979653
ID:
300979653

SRA Run Selector

18.

RIKEN_Cage_hMSC-AT_cell_longPolyA

Organism:
Homo sapiens
Source name:
hMSC-AT
Platform:
GPL11154
Series:
GSE34448
Download data: BEDRNAELEMENTS, BIGWIG
Sample
Accession:
GSM979652
ID:
300979652

SRA Run Selector

19.

RIKEN_Cage_hMSC-BM_cell_longPolyA

Organism:
Homo sapiens
Source name:
hMSC-BM
Platform:
GPL11154
Series:
GSE34448
Download data: BEDRNAELEMENTS, BIGWIG
Sample
Accession:
GSM979651
ID:
300979651

SRA Run Selector

20.

RIKEN_Cage_hMSC-UC_cell_longPolyA

Organism:
Homo sapiens
Source name:
hMSC-UC
Platform:
GPL11154
Series:
GSE34448
Download data: BEDRNAELEMENTS, BIGWIG
Sample
Accession:
GSM979650
ID:
300979650

SRA Run Selector

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