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Items: 13

1.

Divergent transcription of lncRNA/mRNA gene pairs in embryonic stem cells

(Submitter supplied) Many long non-coding RNA (lncRNA) species have been identified in mammalian cells, but the genomic origin, regulation and function of these molecules in individual cell types is poorly understood. We have generated comprehensive catalogs of lncRNA species expressed in human and murine embryonic stem cells (ESCs) and mapped their genomic origin. A surprisingly large fraction of these transcripts (>60%) originate from divergent transcription at promoters of active protein-coding genes. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing
Platform:
GPL11154
11 Samples
Download data: BED, TXT, WIG
Series
Accession:
GSE41009
ID:
200041009

Analyze with GEO2RSRA Run Selector

2.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10400 Series
180082 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

3.

GroSeq_48hr_1-2

Organism:
Homo sapiens
Source name:
GRO-seq H1-hESC-48hr-Activin
Platform:
GPL11154
Series:
GSE41009
Download data: WIG
Sample
Accession:
GSM1006731
ID:
301006731

SRA Run Selector

4.

GroSeq_1hr_1-2

Organism:
Homo sapiens
Source name:
GRO-seq H1-hESC-1hr-Activin
Platform:
GPL11154
Series:
GSE41009
Download data: WIG
Sample
Accession:
GSM1006730
ID:
301006730

SRA Run Selector

5.

GroSeq_0hr_1-2

Organism:
Homo sapiens
Source name:
GRO-seq H1-hESC-RPMI
Platform:
GPL11154
Series:
GSE41009
Download data: WIG
Sample
Accession:
GSM1006729
ID:
301006729

SRA Run Selector

6.

GroSeq_hESC_1-3

Organism:
Homo sapiens
Source name:
GRO-seq H1-hESC
Platform:
GPL11154
Series:
GSE41009
Download data: WIG
Sample
Accession:
GSM1006728
ID:
301006728

SRA Run Selector

7.

RNA_Seq_48hr_2

Organism:
Homo sapiens
Source name:
RNA-seq H1-hESC-48hr-Activin
Platform:
GPL11154
Series:
GSE41009
Download data
Sample
Accession:
GSM1006727
ID:
301006727

SRA Run Selector

8.

RNA_Seq_48hr_1

Organism:
Homo sapiens
Source name:
RNA-seq H1-hESC-48hr-Activin
Platform:
GPL11154
Series:
GSE41009
Download data
Sample
Accession:
GSM1006726
ID:
301006726

SRA Run Selector

9.

RNA_Seq_hESC_2

Organism:
Homo sapiens
Source name:
RNA-seq H1-hESC
Platform:
GPL11154
Series:
GSE41009
Download data
Sample
Accession:
GSM1006725
ID:
301006725

SRA Run Selector

10.

RNA_Seq_hESC_1

Organism:
Homo sapiens
Source name:
RNA-seq H1-hESC
Platform:
GPL11154
Series:
GSE41009
Download data
Sample
Accession:
GSM1006724
ID:
301006724

SRA Run Selector

11.

48hr_IgG_ChipSeq

Organism:
Homo sapiens
Source name:
Chromatin IP against 48hr_IgG
Platform:
GPL11154
Series:
GSE41009
Download data: WIG
Sample
Accession:
GSM1006723
ID:
301006723

SRA Run Selector

12.

48hr_H3K4me3_ChipSeq

Organism:
Homo sapiens
Source name:
Chromatin IP against 48hr_H3K4me3
Platform:
GPL11154
Series:
GSE41009
Download data: WIG
Sample
Accession:
GSM1006722
ID:
301006722

SRA Run Selector

13.

48hr_H3K27ac_ChipSeq

Organism:
Homo sapiens
Source name:
Chromatin IP against 48hr_H3K27ac
Platform:
GPL11154
Series:
GSE41009
Download data: WIG
Sample
Accession:
GSM1006721
ID:
301006721

SRA Run Selector

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