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Items: 7

1.

Enrichment of processed pseudogene transcripts in L1-ribonucleoprotein particles

(Submitter supplied) We explored the RNA binding properties of LINE-1 ORF1p, both free and in the L1 RNP, using a recently developed photoactivatable-ribonucleoside-enhanced crosslinking and immunoprecipitation technique (PAR-CLIP) to comprehensively identify ORF1p binding sites in the transcriptome of human cells (HEK293T). Our results show that ORF1p binds to a wide range of cellular mRNAs, with an enrichment for binding at the 3’ UTR. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Other
Platform:
GPL11154
5 Samples
Download data: BW
Series
Accession:
GSE43801
ID:
200043801
2.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
3.

HuR

Organism:
Homo sapiens
Source name:
HEK293T
Platform:
GPL11154
Series:
GSE43801
Download data: BW
Sample
Accession:
GSM1071443
ID:
301071443
4.

ORF1p replicate 2

Organism:
Homo sapiens
Source name:
HEK293T
Platform:
GPL11154
Series:
GSE43801
Download data: BW
Sample
Accession:
GSM1071442
ID:
301071442
5.

ORF1p replicate 1

Organism:
Homo sapiens
Source name:
HEK293T
Platform:
GPL11154
Series:
GSE43801
Download data: BW
Sample
Accession:
GSM1071441
ID:
301071441
6.

ORF1p/RNP replicate 2

Organism:
Homo sapiens
Source name:
HEK293T
Platform:
GPL11154
Series:
GSE43801
Download data: BW
Sample
Accession:
GSM1071440
ID:
301071440
7.

ORF1p/RNP replicate 1

Organism:
Homo sapiens
Source name:
HEK293T
Platform:
GPL11154
Series:
GSE43801
Download data: BW
Sample
Accession:
GSM1071439
ID:
301071439
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Supplemental Content

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