GSE47917[Accession] - GEO DataSets - NCBI

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Select item 2000479171.

Genome alterations in human pluripotent stem cells as very early events highly dependent on cell passaging conditions

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Genome variation profiling by SNP array; Expression profiling by array; Expression profiling by high throughput sequencing

Platforms:: GPL6801 GPL11154 GPL13667
30 Samples

Download data: CEL, CHP, CNCHP, TXT

Series

Accession:: GSE47917

ID:: 200047917

Analyze with GEO2R

Select item 1000136672.

[HG-U219] Affymetrix Human Genome U219 Array

(Submitter supplied) see manufacturer's website

Organism:: Homo sapiens

216 Series
10 Related Platforms
14953 Samples

Platform

Accession:: GPL13667

ID:: 100013667

Select item 1000111543.

Illumina HiSeq 2000 (Homo sapiens)

Organism:: Homo sapiens

10400 Series
180082 Samples

Platform

Accession:: GPL11154

ID:: 100011154

Select item 1000068014.

[GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 (ucsc=hg18; ncbi=NCBI36) August 01, 2012: annotation table updated with netaffx build 32 (ucsc=hg19; ncbi=GRCh37) Protocol: see manufacturer's web site The new Affymetrix® Genome-Wide Human SNP Array 6.0 features 1.8 million genetic markers, including more than 906,600 single nucleotide polymorphisms (SNPs) and more than 946,000 probes for the detection of copy number variation. more...

Organism:: Homo sapiens

403 Series
22856 Samples

Platform

Accession:: GPL6801

ID:: 100006801

Select item 3011630725.

HD291 line after 15 enzymatic passages

Organism:: Homo sapiens

Source name:: Embryonic stem cell line

Platform:: GPL11154
Series:: GSE47917 GSE47946

Download data: TXT

Sample

Accession:: GSM1163072

ID:: 301163072

SRA Run Selector

Select item 3011630716.

HD291 line after 15 mechanic passages

Organism:: Homo sapiens

Source name:: Embryonic stem cell line

Platform:: GPL11154
Series:: GSE47917 GSE47946

Download data: TXT

Sample

Accession:: GSM1163071

ID:: 301163071

SRA Run Selector

Select item 3011630707.

HD291 line at initial passage 13

Organism:: Homo sapiens

Source name:: Embryonic stem cell line

Platform:: GPL11154
Series:: GSE47917 GSE47946

Download data: TXT

Sample

Accession:: GSM1163070

ID:: 301163070

SRA Run Selector

Select item 3011623898.

HS306 line cells after 9 mechanic passages in presence of Y27632

Organism:: Homo sapiens

Source name:: hESC in mechanic passaging condition in presence of Y27632 (control)

Platform:: GPL6801
Series:: GSE47914 GSE47917

Download data: CEL, CNCHP

Sample

Accession:: GSM1162389

ID:: 301162389

Select item 3011623889.

HD129 line cells after 9 mechanic passages in presence of Y27632

Organism:: Homo sapiens

Source name:: hESC in mechanic passaging condition in presence of Y27632 (control)

Platform:: GPL6801
Series:: GSE47914 GSE47917

Download data: CEL, CNCHP

Sample

Accession:: GSM1162388

ID:: 301162388

Select item 30116238710.

HS306 line cells after 7 mechanic passages

Organism:: Homo sapiens

Source name:: hESC in mechanic passaging condition

Platform:: GPL6801
Series:: GSE47914 GSE47917

Download data: CEL, CNCHP

Sample

Accession:: GSM1162387

ID:: 301162387

Select item 30116238611.

HS306 line cells after 10 mechanic passages

Organism:: Homo sapiens

Source name:: hESC in mechanic passaging condition

Platform:: GPL6801
Series:: GSE47914 GSE47917

Download data: CEL, CNCHP

Sample

Accession:: GSM1162386

ID:: 301162386

Select item 30116238512.

HS306 line cells after 5 enzymatic passages

Organism:: Homo sapiens

Source name:: hESC in enzymatic passaging condition

Platform:: GPL6801
Series:: GSE47914 GSE47917

Download data: CEL, CNCHP

Sample

Accession:: GSM1162385

ID:: 301162385

Select item 30116238413.

HS306 line cells after 10 enzymatic passages

Organism:: Homo sapiens

Source name:: hESC in enzymatic passaging condition

Platform:: GPL6801
Series:: GSE47914 GSE47917

Download data: CEL, CNCHP

Sample

Accession:: GSM1162384

ID:: 301162384

Select item 30116238314.

HS306 line cells at initial passage 25

Organism:: Homo sapiens

Source name:: hESC at initial passage

Platform:: GPL6801
Series:: GSE47914 GSE47917

Download data: CEL, CNCHP

Sample

Accession:: GSM1162383

ID:: 301162383

Select item 30116237915.

HD291 line cells after 15 mechanic passages

Organism:: Homo sapiens

Source name:: hESC in mechanic passaging condition

Platform:: GPL6801
Series:: GSE47914 GSE47917

Download data: CEL, CNCHP

Sample

Accession:: GSM1162379

ID:: 301162379

Select item 30116237816.

HD291 line cells after 30 mechanic and 15 enzymatic passages

Organism:: Homo sapiens

Source name:: hESC in swapped mechanic/enzymatic passaging condition

Platform:: GPL6801
Series:: GSE47914 GSE47917

Download data: CEL, CNCHP

Sample

Accession:: GSM1162378

ID:: 301162378

Select item 30116237717.

HD291 line cells after 30 enzymatic and 15 mechanic passages

Organism:: Homo sapiens

Source name:: hESC in swapped enzymatic/mechanic passaging condition

Platform:: GPL6801
Series:: GSE47914 GSE47917

Download data: CEL, CNCHP

Sample

Accession:: GSM1162377

ID:: 301162377

Select item 30116237618.

HD291 line cells after 30 mechanic passages

Organism:: Homo sapiens

Source name:: hESC in mechanic passaging condition

Platform:: GPL6801
Series:: GSE47914 GSE47917

Download data: CEL, CNCHP

Sample

Accession:: GSM1162376

ID:: 301162376

Select item 30116237419.

HD291 line cells after 30 enzymatic passages

Organism:: Homo sapiens

Source name:: hESC in enzymatic passaging condition

Platform:: GPL6801
Series:: GSE47914 GSE47917

Download data: CEL, CNCHP

Sample

Accession:: GSM1162374

ID:: 301162374

Select item 30116237320.

HD291 line cells after 15 enzymatic passages

Organism:: Homo sapiens

Source name:: hESC in enzymatic passaging condition

Platform:: GPL6801
Series:: GSE47914 GSE47917

Download data: CEL, CNCHP

Sample

Accession:: GSM1162373

ID:: 301162373

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