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Items: 1 to 20 of 47

1.

Domains of genomewide gene expression dysregulation in Down syndrome

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus; Homo sapiens
Type:
Methylation profiling by genome tiling array; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
4 related Platforms
42 Samples
Download data: BW, PAIR, TXT
Series
Accession:
GSE55426
ID:
200055426
2.

Illumina HiSeq 2500 (Homo sapiens)

Platform
Accession:
GPL16791
ID:
100016791
3.

Illumina HiSeq 2000 (Mus musculus)

Platform
Accession:
GPL13112
ID:
100013112
4.

NimbleGen HD2 Human whole genome custom array 2.1M [090310_LP_til_HX1]

(Submitter supplied) Custom made nimblegen array NimbleGen file 090310_LP_til_HX1.ndf linked below as supplementary file. Platform table annotations based on NCBI36 build. Protocol: See manufacturer's website
Organism:
Homo sapiens
12 Series
20 Samples
Download data: NDF
Platform
Accession:
GPL10559
ID:
100010559
5.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
6.

Mouse WT

Organism:
Mus musculus
Source name:
WT_MEFs
Platform:
GPL13112
Series:
GSE55426 GSE55504
Download data
Sample
Accession:
GSM1338324
ID:
301338324
7.

Mouse Ts65Dn

Organism:
Mus musculus
Source name:
Ts65Dn_MEFs
Platform:
GPL13112
Series:
GSE55426 GSE55504
Download data
Sample
Accession:
GSM1338323
ID:
301338323
8.

T1DS-DamID-Rep2

Organism:
Homo sapiens
Source name:
Dam-only DamID DNA from T1DS fibroblasts (channel 1) Dam-LaminB1 DamID DNA from T1DS fibroblasts (channel 2)
Platform:
GPL10559
Series:
GSE55289 GSE55426
Download data: PAIR, TXT
Sample
Accession:
GSM1333661
ID:
301333661
9.

T2N-DamID-Rep2

Organism:
Homo sapiens
Source name:
Dam-only DamID DNA from T2N fibroblasts (channel 1) Dam-LaminB1 DamID DNA from T2N fibroblasts (channel 2)
Platform:
GPL10559
Series:
GSE55289 GSE55426
Download data: PAIR, TXT
Sample
Accession:
GSM1333660
ID:
301333660
10.

T1DS-DamID-Rep1

Organism:
Homo sapiens
Source name:
Dam-only DamID DNA from T1DS fibroblasts (channel 1) Dam-LaminB1 DamID DNA from T1DS fibroblasts (channel 2)
Platform:
GPL10559
Series:
GSE55289 GSE55426
Download data: PAIR, TXT
Sample
Accession:
GSM1333659
ID:
301333659
11.

T2N-DamID-Rep1

Organism:
Homo sapiens
Source name:
Dam-only DamID DNA from T2N fibroblasts (channel 1) Dam-LaminB1 DamID DNA from T2N fibroblasts (channel 2)
Platform:
GPL10559
Series:
GSE55289 GSE55426
Download data: PAIR, TXT
Sample
Accession:
GSM1333658
ID:
301333658
12.

T2N H3K4me3 ChIP

Organism:
Homo sapiens
Source name:
twin 2_euploid_fetal primary fibroblasts_ChIP
Platform:
GPL16791
Series:
GSE55426 GSE55506
Download data
Sample
Accession:
GSM1338344
ID:
301338344
13.

T1DS H3K4me3 ChIP

Organism:
Homo sapiens
Source name:
twin 1_T21_fetal primary fibroblasts_ChIP
Platform:
GPL16791
Series:
GSE55426 GSE55506
Download data
Sample
Accession:
GSM1338343
ID:
301338343
14.

T2N Rep3

Organism:
Homo sapiens
Source name:
twin 2_euploid_fetal primary fibroblasts
Platform:
GPL16791
Series:
GSE55426 GSE55504
Download data
Sample
Accession:
GSM1338318
ID:
301338318
15.

T1DS Rep3

Organism:
Homo sapiens
Source name:
twin 1_T21_fetal primary fibroblasts
Platform:
GPL16791
Series:
GSE55426 GSE55504
Download data
Sample
Accession:
GSM1338317
ID:
301338317
16.

T2N Rep2

Organism:
Homo sapiens
Source name:
twin 2_euploid_fetal primary fibroblasts
Platform:
GPL16791
Series:
GSE55426 GSE55504
Download data
Sample
Accession:
GSM1338316
ID:
301338316
17.

T1DS Rep2

Organism:
Homo sapiens
Source name:
twin 1_T21_fetal primary fibroblasts
Platform:
GPL16791
Series:
GSE55426 GSE55504
Download data
Sample
Accession:
GSM1338315
ID:
301338315
18.

T2N RRBS

Organism:
Homo sapiens
Source name:
twin 2_euploid_fetal primary fibroblasts
Platform:
GPL11154
Series:
GSE55426 GSE55505
Download data
Sample
Accession:
GSM1338342
ID:
301338342
19.

T1DS RRBS

Organism:
Homo sapiens
Source name:
twin 1_T21_fetal primary fibroblasts
Platform:
GPL11154
Series:
GSE55426 GSE55505
Download data
Sample
Accession:
GSM1338341
ID:
301338341
20.

Unrelated individual Ts8

Organism:
Homo sapiens
Source name:
unrelated individual_T21_primary fibroblasts
Platform:
GPL11154
Series:
GSE55426 GSE55504
Download data
Sample
Accession:
GSM1338340
ID:
301338340
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