GSE78913[Accession] - GEO DataSets - NCBI

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Tracing Enhancer Networks using Epigenetic Traits (TENET)

(Submitter supplied) Although technological advances now allow increased tumor profiling, a detailed understanding of the mechanisms leading to the development of different cancers remains elusive. Our approach towards understanding the molecular events that lead to cancer is to characterize changes in transcriptional regulatory networks between normal and tumor tissue. Because enhancer activity is thought to be critical in regulating cell fate decisions, we have focused our studies on distal regulatory elements and transcription factors that bind to these elements. more...

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

Platforms:: GPL11154 GPL18573
29 Samples

Download data: TXT

Series

Accession:: GSE78913

ID:: 200078913

PubMed Full text in PMC Similar studies Analyze with GEO2R SRA Run Selector

Select item 1000185732.

Illumina NextSeq 500 (Homo sapiens)

Organism:: Homo sapiens

12045 Series
332544 Samples

Platform

Accession:: GPL18573

ID:: 100018573

Select item 1000111543.

Illumina HiSeq 2000 (Homo sapiens)

Organism:: Homo sapiens

10425 Series
180579 Samples

Platform

Accession:: GPL11154

ID:: 100011154

Select item 3021757894.

MCF7+EtOH ChIP-seq input

Organism:: Homo sapiens

Source name:: MCF7+EtOH ChIP-seq input

Platform:: GPL11154
Series:: GSE78913

Sample

Accession:: GSM2175789

ID:: 302175789

SRA Run Selector

Select item 3021757885.

H3K27Ac ChIP-seq MCF7+EtOH rep2

Organism:: Homo sapiens

Source name:: H3K27Ac ChIP-seq MCF7+EtOH

Platform:: GPL11154
Series:: GSE78913

Download data: TXT

Sample

Accession:: GSM2175788

ID:: 302175788

SRA Run Selector

Select item 3021757876.

H3K27Ac ChIP-seq MCF7+EtOH rep1

Organism:: Homo sapiens

Source name:: H3K27Ac ChIP-seq MCF7+EtOH

Platform:: GPL11154
Series:: GSE78913

Download data: TXT

Sample

Accession:: GSM2175787

ID:: 302175787

SRA Run Selector

Select item 3021757867.

MCF7+E2 ChIP-seq input

Organism:: Homo sapiens

Source name:: MCF7+E2 ChIP-seq input

Platform:: GPL11154
Series:: GSE78913

Sample

Accession:: GSM2175786

ID:: 302175786

SRA Run Selector

Select item 3021757858.

H3K27Ac ChIP-seq MCF7+E2 rep2

Organism:: Homo sapiens

Source name:: H3K27Ac ChIP-seq MCF7+E2

Platform:: GPL11154
Series:: GSE78913

Download data: TXT

Sample

Accession:: GSM2175785

ID:: 302175785

SRA Run Selector

Select item 3021757849.

H3K27Ac ChIP-seq MCF7+E2 rep1

Organism:: Homo sapiens

Source name:: H3K27Ac ChIP-seq MCF7+E2

Platform:: GPL11154
Series:: GSE78913

Download data: TXT

Sample

Accession:: GSM2175784

ID:: 302175784

SRA Run Selector

Select item 30217578310.

MCF10A ChIP-seq input

Organism:: Homo sapiens

Source name:: MCF10A ChIP-seq input

Platform:: GPL11154
Series:: GSE78913

Sample

Accession:: GSM2175783

ID:: 302175783

SRA Run Selector

Select item 30217578211.

H3K27Ac ChIP-seq MCF10A rep2

Organism:: Homo sapiens

Source name:: H3K27Ac ChIP-seq MCF10A

Platform:: GPL11154
Series:: GSE78913

Download data: TXT

Sample

Accession:: GSM2175782

ID:: 302175782

SRA Run Selector

Select item 30217578112.

H3K27Ac ChIP-seq MCF10A rep1

Organism:: Homo sapiens

Source name:: H3K27Ac ChIP-seq MCF10A

Platform:: GPL11154
Series:: GSE78913

Download data: TXT

Sample

Accession:: GSM2175781

ID:: 302175781

SRA Run Selector

Select item 30217578013.

MCF10A FAIRE-seq input

Organism:: Homo sapiens

Source name:: MCF10A FAIRE-seq input

Platform:: GPL11154
Series:: GSE78913

Sample

Accession:: GSM2175780

ID:: 302175780

SRA Run Selector

Select item 30217577914.

FAIRE-seq MCF10A rep2

Organism:: Homo sapiens

Source name:: FAIRE-seq MCF10A

Platform:: GPL11154
Series:: GSE78913

Download data: TXT

Sample

Accession:: GSM2175779

ID:: 302175779

SRA Run Selector

Select item 30217577815.

FAIRE-seq MCF10A rep1

Organism:: Homo sapiens

Source name:: FAIRE-seq MCF10A

Platform:: GPL11154
Series:: GSE78913

Download data: TXT

Sample

Accession:: GSM2175778

ID:: 302175778

SRA Run Selector

Select item 30208092216.

ChIP-seq Input RWPE1 rep2

Organism:: Homo sapiens

Source name:: Human prostate cell line RWPE1

Platform:: GPL11154
Series:: GSE78913

Sample

Accession:: GSM2080922

ID:: 302080922

SRA Run Selector

Select item 30208091417.

H3K27Ac ChIP-seq C42B rep2

Organism:: Homo sapiens

Source name:: Human prostate cancer cell line C42B

Platform:: GPL11154
Series:: GSE78913

Download data: TXT

Sample

Accession:: GSM2080914

ID:: 302080914

SRA Run Selector

Select item 30208092118.

ChIP-seq Input RWPE1 rep1

Organism:: Homo sapiens

Source name:: Human prostate cell line RWPE1

Platform:: GPL18573
Series:: GSE78913

Sample

Accession:: GSM2080921

ID:: 302080921

SRA Run Selector

Select item 30208091819.

H3K27Ac ChIP-seq RWPE1 rep2

Organism:: Homo sapiens

Source name:: Human prostate cell line RWPE1

Platform:: GPL18573
Series:: GSE78913

Download data: TXT

Sample

Accession:: GSM2080918

ID:: 302080918

SRA Run Selector

Select item 30208091720.

H3K27Ac ChIP-seq RWPE1 rep1

Organism:: Homo sapiens

Source name:: Human prostate cell line RWPE1

Platform:: GPL18573
Series:: GSE78913

Download data: TXT

Sample

Accession:: GSM2080917

ID:: 302080917

SRA Run Selector

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