Similar studies for GEO DataSets (Select 200242075) - GEO DataSets

Select item 2002420751.

Salinity stress-induced phosphorylation of INDETERMINATE-DOMAIN 4 (IDD4) regulates plant growth adaptation in Arabidopsis

(Submitter supplied) The objective of the study was to understand the role of IDD4 in transcriptional regulation of genes involved in salt-stress response

Organism:: Arabidopsis thaliana

Type:: Expression profiling by high throughput sequencing

Platform:: GPL17639
8 Samples

Download data: XLS

Series

Accession:: GSE242075

ID:: 200242075

PubMed Full text in PMC Similar studies

Select item 2001200682.

INDETERMINATE-DOMAIN 4 (IDD4) coordinates immune responses with plant-growth in Arabidopsis thaliana.

(Submitter supplied) We report the transcriptome composition of idd mutant with and without flg22 treatment compared to WT (ColO). Furthermore, we provide transcriptome data of a IDD4ox line and IDD4-phospho-peptide modified versions without treatment compared to WT (ColO), respectively. In order to identify the genomic regions targeted by IDD4 in vivo, Chromatin-Immunoprecipitation (ChIP) was performed followed by deep sequencing on the Illumina High-Sequencing2000 platform (SEQ).

Organism:: Arabidopsis thaliana

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL21785
28 Samples

Download data: WIG, XLSX

Series

Accession:: GSE120068

ID:: 200120068

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001207913.

A chimeric IDD4 repressor constitutively induces immunity in Arabidopsis with the potential application for crop improvement

(Submitter supplied) We report the transcriptome composition of idd4SRDX lines compared to Columbia wild-type plant

Organism:: Arabidopsis thaliana

Type:: Expression profiling by high throughput sequencing

Platform:: GPL17639
6 Samples

Download data: XLSX

Series

Accession:: GSE120791

ID:: 200120791

PubMed Similar studies SRA Run Selector

Select item 2000407354.

Regulation of Oxidative Stress Responses by the Arabidopsis Heat Shock Factor A4A

(Submitter supplied) Identification of target genes for the transcription factor HSFA4A in Arabidopsis thaliana.

Organism:: Arabidopsis thaliana

Type:: Expression profiling by high throughput sequencing

Platform:: GPL16033
4 Samples

Download data: TXT, XLS

Series

Accession:: GSE40735

ID:: 200040735

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001478125.

N6-methyladenosine and RNA secondary structure affect transcript stability and translation during systemic salt stress in Arabidopsis

(Submitter supplied) After transcription, a messenger RNA (mRNA) is further post-transcriptionally regulated by several features including RNA secondary structure and covalent RNA modifications (specifically N6-methyladenosine, m6A). Both RNA secondary structure and m6A have been demonstrated to regulate mRNA stability and translation as well as have been independently linked to plant response to excess salt concentrations in the soil. more...

Organism:: Arabidopsis thaliana

Type:: Other

Platform:: GPL13222
16 Samples

Download data: BED, TXT

Series

Accession:: GSE147812

ID:: 200147812

PubMed Full text in PMC Similar studies SRA Run Selector

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