PCGF Homologs and RYBP Define Functionally Distinct PRC1 Family Complexes

Transcriptome profiling of epidermal differentiation

Characterization of genome-wide enhancer-promoter interactions reveals co-expression of interacting genes and modes of higher order chromatin organization

Widespread regulated alternative splicing of single codons accelerates proteome evolution

RNA Subcellular CAGE Localization from ENCODE/RIKEN

Genome-wide Runx2 occupancy in prostate cancer cells suggests a role in regulating secretion.

RNA Subcellular Localization by Paired End diTag Sequencing from ENCODE/GIS

Transposon-based construction of strand-specific RNA-seq libraries

Genome-wide location analysis of WNT (Tcf7l2) and BMP (SMAD1) in human hematopoeitic cell lines co-occupied with lineage specific regulators (GATA1, GATA2, CEBPA)

Lineage regulators direct BMP and Wnt pathways to cell-specific programs during differentiation and regeneration

RNA-Seq of human neurons derived from iPS cells Reveals candidate long non-coding RNAs Involved in neurogenesis and neuropsychiatric disorders.

Global DNA Hypomethylation Coupled to Repressive Chromatin Domain Formation and Gene Silencing in Breast Cancer

Bisulfite sequencing of ChIP DNA on breast cancer cells (HCC1954)

Genome-wide DNA methylation mapping in breast cancer cells (HCC1954) and normal breast cells (HMEC)

[E-MTAB-513] Illumina Human Body Map 2.0 Project

ENCODE Cold Spring Harbor Labs Long RNA-seq (hg19)

Unstressed HeLa cells and ELAVL1/HuR knock down conditions: polyA RNA-Seq, small RNA-Seq, and PAR-CLIP

Histone Modifications by ChIP-seq from ENCODE/Broad Institute

DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]

ENCODE Cold Spring Harbor Labs Long RNA-seq