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| Status |
Public on Jul 14, 2011 |
| Title |
[E-MTAB-513] Illumina Human Body Map 2.0 Project |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Illumina bodyMap2 transcriptome
Transcription profiling by high throughput sequencing of individual and mixture of 16 human tissues RNA. Additional supplementary files available at foot of this record.
Additional information available as supplementary files at the foot of this record.
ArrayExpress Release Date: 2011-03-17
Person Roles: submitter
Person Last Name: Khrebtukova
Person First Name: Irina
Person Mid Initials:
Person Email: ikhrebtukova@illumina.com
Person Phone: 1-510-723-9219
Person Address: 25861 Industrial Blvd, Hayward CA 94545, USA
Person Affiliation: Illumina
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| Overall design |
Experimental Design: organism_part_comparison_design
Experimental Design: co-expression_design
Experimental Design: optimization_design
Experimental Factor Name: ORGANISMPART
Experimental Factor Name: LIBRARYPREP
Experimental Factor Name: PHENOTYPE
Experimental Factor Type: organism_part
Experimental Factor Type: protocol
Experimental Factor Type: phenotype
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| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Jul 12, 2011 |
| Last update date |
Jun 12, 2019 |
| Organization |
European Bioinformatics Institute |
| E-mail(s) |
miamexpress@ebi.ac.uk
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| Lab |
ArrayExpress
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| Street address |
Wellcome Trust Genome Campus
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| City |
Hinxton |
| State/province |
Cambridgeshire |
| ZIP/Postal code |
CB10 1SD |
| Country |
United Kingdom |
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| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
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| Samples (48)
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| GSM759490 |
[E-MTAB-513] HCT20158, adipose, female, 73 years, 1x75 single mRNA-Seq |
| GSM759491 |
[E-MTAB-513] HCT20158, adipose, female, 73 years, 2x50 paired end mRNA-seq |
| GSM759492 |
[E-MTAB-513] HCT20159, adrenal, male, 60 years, 1x75 single mRNA-Seq |
| GSM759493 |
[E-MTAB-513] HCT20159, adrenal, male, 60 years, 2x50 paired end mRNA-seq |
| GSM759494 |
[E-MTAB-513] HCT20160, brain, female, 77 years, 1x75 single mRNA-Seq |
| GSM759495 |
[E-MTAB-513] HCT20160, brain, female, 77 years, 2x50 paired end mRNA-seq |
| GSM759496 |
[E-MTAB-513] HCT20161, breast, female, 29 years, 1x75 single mRNA-Seq |
| GSM759497 |
[E-MTAB-513] HCT20161, breast, female, 29 years, 2x50 paired end mRNA-seq |
| GSM759498 |
[E-MTAB-513] HCT20162, colon, female, 68 years, 1x75 single mRNA-Seq |
| GSM759499 |
[E-MTAB-513] HCT20162, colon, female, 68 years, 2x50 paired end mRNA-seq |
| GSM759500 |
[E-MTAB-513] HCT20143, heart, male, 77 years, 1x75 single mRNA-Seq |
| GSM759501 |
[E-MTAB-513] HCT20143, heart, male, 77 years, 2x50 paired end mRNA-seq |
| GSM759502 |
[E-MTAB-513] HCT20142, kidney, female, 60 years, 1x75 single mRNA-Seq |
| GSM759503 |
[E-MTAB-513] HCT20142, kidney, female, 60 years, 2x50 paired end mRNA-seq |
| GSM759504 |
[E-MTAB-513] HCT20144, liver, male, 37 years, 1x75 single mRNA-Seq |
| GSM759505 |
[E-MTAB-513] HCT20144, liver, male, 37 years, 2x50 paired end mRNA-seq |
| GSM759506 |
[E-MTAB-513] HCT20145, lung, male, 65 years, 1x75 single mRNA-Seq |
| GSM759507 |
[E-MTAB-513] HCT20145, lung, male, 65 years, 2x50 paired end mRNA-seq |
| GSM759508 |
[E-MTAB-513] HCT20146, lymph node, female, 86 years, 1x75 single mRNA-Seq |
| GSM759509 |
[E-MTAB-513] HCT20146, lymph node, female, 86 years, 2x50 paired end mRNA-seq |
| GSM759510 |
[E-MTAB-513] HCT20150, ovary, female, 47 years, 1x75 single mRNA-Seq |
| GSM759511 |
[E-MTAB-513] HCT20150, ovary, female, 47 years, 2x50 paired end mRNA-seq |
| GSM759512 |
[E-MTAB-513] HCT20147, prostate, male, 73 years, 1x75 single mRNA-Seq |
| GSM759513 |
[E-MTAB-513] HCT20147, prostate, male, 73 years, 2x50 paired end mRNA-seq |
| GSM759514 |
[E-MTAB-513] HCT20148, skeletal muscle, male, 77 years, 1x75 single mRNA-Seq |
| GSM759515 |
[E-MTAB-513] HCT20148, skeletal muscle, male, 77 years, 2x50 paired end mRNA-seq |
| GSM759516 |
[E-MTAB-513] HCT20151, testes, male, 19 years, 1x75 single mRNA-Seq |
| GSM759517 |
[E-MTAB-513] HCT20151, testes, male, 19 years, 2x50 paired end mRNA-seq |
| GSM759518 |
[E-MTAB-513] HCT20152, thyroid, female, 60 years, 1x75 single mRNA-Seq |
| GSM759519 |
[E-MTAB-513] HCT20152, thyroid, female, 60 years, 2x50 paired end mRNA-seq |
| GSM759520 |
[E-MTAB-513] HCT20149, white blood cells, male, 58 years, 1x75 single mRNA-Seq |
| GSM759521 |
[E-MTAB-513] HCT20149, white blood cells, male, 58 years, 2x50 paired end mRNA-seq |
| GSM759522 |
[E-MTAB-513] HCT20170, 16 Tissues mixture, 100bp_Stranded_RNA_Seq_FCB_s_1_sequence |
| GSM759523 |
[E-MTAB-513] HCT20170, 16 Tissues mixture, 100bp_Stranded_RNA_Seq_FCB_s_2_sequence |
| GSM759524 |
[E-MTAB-513] HCT20170, 16 Tissues mixture, 100bp_Stranded_RNA_Seq_FCA_s_2_sequence |
| GSM759525 |
[E-MTAB-513] HCT20170, 16 Tissues mixture, 100bp_Stranded_RNA_Seq_FCA_s_3_sequence |
| GSM759526 |
[E-MTAB-513] HCT20170, 16 Tissues mixture, 100bp_Stranded_RNA_Seq_FCA_s_1_sequence |
| GSM759527 |
[E-MTAB-513] HCT20172, 16 Tissues mixture, 100bp_Stranded_RNA_Seq_FCA_s_4_sequence |
| GSM759528 |
[E-MTAB-513] HCT20172, 16 Tissues mixture, 100bp_Stranded_RNA_Seq_FCB_s_4_sequence |
| GSM759529 |
[E-MTAB-513] HCT20172, 16 Tissues mixture, 100bp_Stranded_RNA_Seq_FCA_s_6_sequence |
| GSM759530 |
[E-MTAB-513] HCT20172, 16 Tissues mixture, 100bp_Stranded_RNA_Seq_FCB_s_3_sequence |
| GSM759531 |
[E-MTAB-513] HCT20172, 16 Tissues mixture, 100bp_Stranded_RNA_Seq_FCA_s_5_sequence |
| GSM759532 |
[E-MTAB-513] HCT20173, 16 Tissues mixture, 100bp_Stranded_RNA_Seq_FCB_s_5_sequence |
| GSM759533 |
[E-MTAB-513] HCT20173, 16 Tissues mixture, 100bp_Stranded_RNA_Seq_FCB_s_6_sequence |
| GSM759534 |
[E-MTAB-513] HCT20173, 16 Tissues mixture, 100bp_Stranded_RNA_Seq_FCB_s_8_sequence |
| GSM759535 |
[E-MTAB-513] HCT20173, 16 Tissues mixture, 100bp_Stranded_RNA_Seq_FCA_s_8_sequence |
| GSM759536 |
[E-MTAB-513] HCT20173, 16 Tissues mixture, 100bp_Stranded_RNA_Seq_FCA_s_7_sequence |
| GSM759537 |
[E-MTAB-513] HCT20173, 16 Tissues mixture, 100bp_Stranded_RNA_Seq_FCB_s_7_sequence |
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| Relations |
| SRA |
ERP000546 |
| ArrayExpress |
E-MTAB-513 |
| BioProject |
PRJNA144517 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE30611_HiSeq_2000_Human_Tissue_Data_v1.pdf.gz |
2.0 Mb |
(ftp)(http) |
PDF |
SRA Run Selector |
| Processed data not provided for this record |
| Raw data are available in SRA |
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