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Platform GPL18900 Query DataSets for GPL18900
Status Public on Jul 07, 2014
Title HumanOmniExpress-12v1 BeadChip
Technology type oligonucleotide beads
Distribution commercial
Organism Homo sapiens
Manufacturer Illumina, Inc.
Manufacture protocol See manufacturer's website
 
 
Submission date Jul 07, 2014
Last update date Jul 07, 2014
Organization Illumina Inc.
E-mail(s) expression@illumina.com, techsupport@illumina.com
Phone 1 800 809 4566
URL http://www.illumina.com
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Samples (749) GSM1432173, GSM1432174, GSM1432175, GSM1432176, GSM1432177, GSM1432178 
Series (18)
GSE59265 Genome wide DNA copy number analysis of sarcomatoid renal cell carcinoma.
GSE59266 Genome wide analysis of sarcomatoid and non-sarcomatoid clear cell renal cell carcinoma
GSE66409 Expression of CD271 in genetically unstable patient melanomas is highly variable and not linked to tumorigenic potential in an assay-dependent manner

Data table header descriptions
ID
SNP_ID NCBI SNP accession
SPOT_ID
IlmnStrand
SNP
AddressA_ID
AlleleA_ProbeSeq
AddressB_ID
AlleleB_ProbeSeq
GenomeBuild
Chr
MapInfo
Ploidy
Species
Source
SourceVersion
SourceStrand
SourceSeq
TopGenomicSeq
BeadSetID
Exp_Clusters
RefStrand

Data table
ID SNP_ID SPOT_ID IlmnStrand SNP AddressA_ID AlleleA_ProbeSeq AddressB_ID AlleleB_ProbeSeq GenomeBuild Chr MapInfo Ploidy Species Source SourceVersion SourceStrand SourceSeq TopGenomicSeq BeadSetID Exp_Clusters RefStrand
rs1000000-131_B_F_1856971882 rs1000000 BOT [T/C] 48741381 GACTTGGAAATTCCTGGAGGTCTTTTTCCATCCTCTCCTGCCTTCTTTAG 37.1 12 126890980 diploid Homo sapiens dbSNP 131 BOT TCCCAGGGTTGACTTGGAAATTCCTGGAGGTCTTTTTCCATCCTCTCCTGCCTTCTTTAG[T/C]TTATTTAAGGCTTAGTCGTTCATGGTCCCTAGGTGGCTGCCTCTGATTCAGGCACCATCA TGATGGTGCCTGAATCAGAGGCAGCCACCTAGGGACCATGAACGACTAAGCCTTAAATAA[A/G]CTAAAGAAGGCAGGAGAGGATGGAAAAAGACCTCCAGGAATTTCCAAGTCAACCCTGGGA 230 3 -
rs1000002-131_T_F_1856971897 rs1000002 TOP [A/G] 35682329 ACCCGCTCAGGTGGACTCAGCTTAGGAGGACTAAGCTGGCTGCTGTCCAA 37.1 3 183635768 diploid Homo sapiens dbSNP 131 TOP ACTCCCTTCTACCCGCTCAGGTGGACTCAGCTTAGGAGGACTAAGCTGGCTGCTGTCCAA[A/G]TGAGAACCATCAGAGCTAGTACTTGGTCTCCCGCAGACCTGGCACAGCCCTGTTCTCAAA ACTCCCTTCTACCCGCTCAGGTGGACTCAGCTTAGGAGGACTAAGCTGGCTGCTGTCCAA[A/G]TGAGAACCATCAGAGCTAGTACTTGGTCTCCCGCAGACCTGGCACAGCCCTGTTCTCAAA 228 3 -
rs10000023-131_B_F_1853199520 rs10000023 BOT [T/G] 30778423 GAGCACGGAATGGACAGGAGAGAGAGTTCACAGGTGGAATTGCTAGAATT 37.1 4 95733906 diploid Homo sapiens dbSNP 131 BOT CTGGGAGGGGGAGCACGGAATGGACAGGAGAGAGAGTTCACAGGTGGAATTGCTAGAATT[T/G]GGGGGTTAGTTGGTTTTTGAAAGTGATTTTTTTGGTTTGTCATTAGAAATTGAAAGGATA TATCCTTTCAATTTCTAATGACAAACCAAAAAAATCACTTTCAAAAACCAACTAACCCCC[A/C]AATTCTAGCAATTCCACCTGTGAACTCTCTCTCCTGTCCATTCCGTGCTCCCCCTCCCAG 230 3 +
rs1000003-131_B_R_1856971898 rs1000003 BOT [T/C] 49612304 TGAATTTAATGCCTTAGTCCCAAGAAGAGAGAGGTGCTTTGAGTCAGTGC 37.1 3 98342907 diploid Homo sapiens dbSNP 131 TOP atcagaatctgcattttaacaacagccccaggtgattcatatgcaagttactctttgaga[A/G]gcactgACTCAAAGCACCTCTCTCTTCTTGGGACTAAGGCATTAAATTCAACTGGGACAA atcagaatctgcattttaacaacagccccaggtgattcatatgcaagttactctttgaga[A/G]gcactgACTCAAAGCACCTCTCTCTTCTTGGGACTAAGGCATTAAATTCAACTGGGACAA 228 3 -
rs10000030-131_B_R_1856971899 rs10000030 BOT [T/C] 26615338 CTTTTTCCAAGCTATACAGATTCATAGATATTGGTATCTTTTCTTAAGCC 37.1 4 103374154 diploid Homo sapiens dbSNP 131 TOP TTGATATGACTGTTTCATGAGATTCTATCTGGCTCAATATGATGCAGGTTTAACTACAGC[A/G]GGCTTAAGAAAAGATACCAATATCTATGAATCTGTATAGCTTGGAAAAAGGAGAAAATGC TTGATATGACTGTTTCATGAGATTCTATCTGGCTCAATATGATGCAGGTTTAACTACAGC[A/G]GGCTTAAGAAAAGATACCAATATCTATGAATCTGTATAGCTTGGAAAAAGGAGAAAATGC 216 3 -
rs10000037-131_B_R_1856971902 rs10000037 BOT [T/C] 27702316 AAATAGGTCAGCACGACTGTCATCTTTTCTTCTCGTTAATAACGTTTACA 37.1 4 38924330 diploid Homo sapiens dbSNP 131 TOP cccagCGATACCTCCCACACCATGAATCACTTTTGTCCTGGGAAAACTGGGGACCGCTGT[A/G]TGTAAACGTTATTAACGAGAAGAAAAGATGACAGTCGTGCTGACCTATTTCTTTTTTCAG cccagCGATACCTCCCACACCATGAATCACTTTTGTCCTGGGAAAACTGGGGACCGCTGT[A/G]TGTAAACGTTATTAACGAGAAGAAAAGATGACAGTCGTGCTGACCTATTTCTTTTTTCAG 216 3 -
rs10000041-131_T_R_1856971906 rs10000041 TOP [A/C] 37692345 CGGGATTGCAGCTGGGAACAGGTGAACAGCAACTGGTGCAATGGGGGTGC 37.1 4 165621955 diploid Homo sapiens dbSNP 131 BOT CCCTGCCCCAGCGCATCCCATGCACTCTGAAGGCCCTCTTGTCCTGCAGCCACGTAGCAC[T/G]GCACCCCCATTGCACCAGTTGCTGTTCACCTGTTCCCAGCTGCAATCCCGAGGGTTGCCT AGGCAACCCTCGGGATTGCAGCTGGGAACAGGTGAACAGCAACTGGTGCAATGGGGGTGC[A/C]GTGCTACGTGGCTGCAGGACAAGAGGGCCTTCAGAGTGCATGGGATGCGCTGGGGCAGGG 216 3 -
rs10000042-131_T_R_1858050944 rs10000042 TOP [A/G] 52759471 TTGCCACATATTAAGACATTTCATCTTCACCAAAGCAGTAGGAGTGGCAC 37.1 4 5237152 diploid Homo sapiens dbSNP 131 BOT ggtaagttactcagccacactgtcctccatttcctcatgttggaaagagaatgacaatgg[T/C]gtgccactcctactgctttggtgaagatgaaatgtcttaatatgtggcaagcacttagac gtctaagtgcttgccacatattaagacatttcatcttcaccaaagcagtaggagtggcac[A/G]ccattgtcattctctttccaacatgaggaaatggaggacagtgtggctgagtaacttacc 230 3 -
rs10000049-131_T_F_1856971909 rs10000049 TOP [A/C] 74680473 TTTGCATTTCATCTCTCTCTCTCTGCTTGCTGTGCTTGATGTAGCCCCAA 37.1 4 118948220 diploid Homo sapiens dbSNP 131 TOP AATTGATGACTTTGCATTTCATCTCTCTCTCTCTGCTTGCTGTGCTTGATGTAGCCCCAA[A/C]CAAAAAAAAAAAAAAAAAACTGTTGCCCCCCTAGCATAGATAGGTATAAATAAAAAATAA AATTGATGACTTTGCATTTCATCTCTCTCTCTCTGCTTGCTGTGCTTGATGTAGCCCCAA[A/C]CAAAAAAAAAAAAAAAAAACTGTTGCCCCCCTAGCATAGATAGGTATAAATAAAAAATAA 238 3 +
rs1000007-131_T_F_1856971915 rs1000007 TOP [A/G] 11635340 CTGTCTGTAAGATGAAAACCTGGCCCCATGTCTGTCAAAAAATTTGGAAA 37.1 2 237752054 diploid Homo sapiens dbSNP 131 TOP GGGAGAATTCCTGTCTGTAAGATGAAAACCTGGCCCCATGTCTGTCAAAAAATTTGGAAA[A/G]CTTCAGCTCTTAAGGAGGATATTGGGAATTGTGGACCACGCAGACACCTCAAACTCAGCT GGGAGAATTCCTGTCTGTAAGATGAAAACCTGGCCCCATGTCTGTCAAAAAATTTGGAAA[A/G]CTTCAGCTCTTAAGGAGGATATTGGGAATTGTGGACCACGCAGACACCTCAAACTCAGCT 216 3 -
rs10000073-131_T_R_1858074902 rs10000073 TOP [A/G] 39768504 CAGTTCTTCCCTTTGGAGCTGAGTAAATGTACAACTAGGATGCCAAAGAG 37.1 4 43022222 diploid Homo sapiens dbSNP 131 BOT TTACCTGAGGTAAGACTTACTAGATGGAAGAGTATGTGGCAGTAAGGAAAAATGTCTTCT[T/C]CTCTTTGGCATCCTAGTTGTACATTTACTCAGCTCCAAAGGGAAGAACTGTGCTCAGTAT ATACTGAGCACAGTTCTTCCCTTTGGAGCTGAGTAAATGTACAACTAGGATGCCAAAGAG[A/G]AGAAGACATTTTTCCTTACTGCCACATACTCTTCCATCTAGTAAGTCTTACCTCAGGTAA 238 3 -
rs10000081-131_B_F_1856971919 rs10000081 BOT [T/C] 45733454 TTGTCCACTTTGGTCTTTCTCAGTTGTTTCTGACAGTCACTTAGATGGAC 37.1 4 17348363 diploid Homo sapiens dbSNP 131 BOT TATCTTTTCTTTGTCCACTTTGGTCTTTCTCAGTTGTTTCTGACAGTCACTTAGATGGAC[T/C]CCTTATGCCCTCTGCTACACTCTGCACACTCCTGAGGTACATGAAGGCACAGAGATCTAT ATAGATCTCTGTGCCTTCATGTACCTCAGGAGTGTGCAGAGTGTAGCAGAGGGCATAAGG[A/G]GTCCATCTAAGTGACTGTCAGAAACAACTGAGAAAGACCAAAGTGGACAAAGAAAAGATA 230 3 +
rs10000092-131_T_R_1856971921 rs10000092 TOP [A/G] 67801500 CAAGGTTATGCATAATGCTAATTAGGATCCTAAAGCAGGAAGTAAGGGAA 37.1 4 21895517 diploid Homo sapiens dbSNP 131 BOT AGTTTTGTAGTGGATTACATCTGAACTGAATTTTCAGTGCTGCTGTGTGCATATTAAATG[T/C]TTCCCTTACTTCCTGCTTTAGGATCCTAATTAGCATTATGCATAACCTTGAAAATAATCT AGATTATTTTCAAGGTTATGCATAATGCTAATTAGGATCCTAAAGCAGGAAGTAAGGGAA[A/G]CATTTAATATGCACACAGCAGCACTGAAAATTCAGTTCAGATGTAATCCACTACAAAACT 230 3 -
rs10000105-131_T_F_1858076030 rs10000105 TOP [A/G] 48674497 TGAGACACACATTGTGATTGTGCTTGTTTTTGAAAGACAGAGTCCAGGTC 37.1 4 53623677 diploid Homo sapiens dbSNP 131 TOP AGCAATTGGGTGAGACACACATTGTGATTGTGCTTGTTTTTGAAAGACAGAGTCCAGGTC[A/G]GAATCACAGGGAAGGAAATCAACTACTTCAAAATATTGAACTGGTTAGTGGGAAGCGCTC AGCAATTGGGTGAGACACACATTGTGATTGTGCTTGTTTTTGAAAGACAGAGTCCAGGTC[A/G]GAATCACAGGGAAGGAAATCAACTACTTCAAAATATTGAACTGGTTAGTGGGAAGCGCTC 238 3 +
rs10000119-131_T_R_1856971927 rs10000119 TOP [A/G] 66761328 GAAAATACATGTTTAATAGCTGTATGAACCAAAATGTGAGCGCCATCACC 37.1 4 37796830 diploid Homo sapiens dbSNP 131 BOT AGAATTCTGTGTATCTGCTCTCTTCCACTTAGTGGAAGTGGTACTTGGTCAAATACATGT[T/C]GGTGATGGCGCTCACATTTTGGTTCATACAGCTATTAAACATGTATTTTCTCTCCAACTA TAGTTGGAGAGAAAATACATGTTTAATAGCTGTATGAACCAAAATGTGAGCGCCATCACC[A/G]ACATGTATTTGACCAAGTACCACTTCCACTAAGTGGAAGAGAGCAGATACACAGAATTCT 230 3 -
rs10000124-131_B_R_1853199531 rs10000124 BOT [T/G] 17795425 CCAAGGAGATCCGGAAAGAACCAGAAGCTGATGGCATCCTGGAAGTAAGG 37.1 4 109106451 diploid Homo sapiens dbSNP 131 TOP ttatttgacccatcatcagcatttgacacagttgattacactttcttcaaacgctttctt[A/C]ccttacttccaggatgccatcagcttctggttctttccggatctccttggctcttcgtta ttatttgacccatcatcagcatttgacacagttgattacactttcttcaaacgctttctt[A/C]ccttacttccaggatgccatcagcttctggttctttccggatctccttggctcttcgtta 230 3 -
rs10000154-131_T_F_1856971939 rs10000154 TOP [A/G] 17731478 TGGGGAAATGTACAAGCTTGGGTATCAGGAAGACTTAGGTTTGAATTCTA 37.1 4 80666077 diploid Homo sapiens dbSNP 131 TOP TAAGGTATAATGGGGAAATGTACAAGCTTGGGTATCAGGAAGACTTAGGTTTGAATTCTA[A/G]CTCTGCATTGACTCAGTTACATCATTTAGAAAATAAAGAAATGTTTCCTTCTTTTCACAG TAAGGTATAATGGGGAAATGTACAAGCTTGGGTATCAGGAAGACTTAGGTTTGAATTCTA[A/G]CTCTGCATTGACTCAGTTACATCATTTAGAAAATAAAGAAATGTTTCCTTCTTTTCACAG 230 3 +
rs1000016-131_B_R_1856971940 rs1000016 BOT [T/C] 31617387 GGACAGGGATACAGGGAGTAGGGGCTTTGAGAAAAGTGTAACTTATTTGC 37.1 2 235690982 diploid Homo sapiens dbSNP 131 TOP TGTCCTCCCCTCCGTAAGCATTCTTCCTCCCTTTCTTACTCAGCCTGAATCCTGCTATTT[A/G]GCAAATAAGTTACACTTTTCTCAAAGCCCCTACTCCCTGTATCCCTGTCCTGCTATATTC TGTCCTCCCCTCCGTAAGCATTCTTCCTCCCTTTCTTACTCAGCCTGAATCCTGCTATTT[A/G]GCAAATAAGTTACACTTTTCTCAAAGCCCCTACTCCCTGTATCCCTGTCCTGCTATATTC 216 3 -
rs10000160-131_T_F_1858591723 rs10000160 TOP [A/G] 34718504 GGATGTTGTCACTGCTGTTTTGTGATCTAGCCTCCTCATAGCTGCTAGAG 37.1 4 69033099 diploid Homo sapiens dbSNP 131 TOP CTGCCACTGTGGATGTTGTCACTGCTGTTTtgtgatctagcctcctcatagctgctagag[A/G]gccaggtggtacaacctaaaactgtgtcacagtcgatgtgtcatgggaggaatttttttc CTGCCACTGTGGATGTTGTCACTGCTGTTTtgtgatctagcctcctcatagctgctagag[A/G]gccaggtggtacaacctaaaactgtgtcacagtcgatgtgtcatgggaggaatttttttc 230 3 +
rs10000169-131_T_R_1856971945 rs10000169 TOP [A/G] 20664307 CACCACAAAGACCTGACAATTCAAACAGTCTTACAGTTAATAACACGTAG 37.1 4 77356246 diploid Homo sapiens dbSNP 131 BOT TATTCTAGGAACTATTTTCTATCCCTTGGCAATTAGCCATCTGTATAGTATTTTTAACTT[T/C]CTACGTGTTATTAACTGTAAGACTGTTTGAATTGTCAGGTCTTTGTGGTGAGCTGAATTC GAATTCAGCTCACCACAAAGACCTGACAATTCAAACAGTCTTACAGTTAATAACACGTAG[A/G]AAGTTAAAAATACTATACAGATGGCTAATTGCCAAGGGATAGAAAATAGTTCCTAGAATA 230 3 -

Total number of rows: 693566

Table truncated, full table size 287150 Kbytes.




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GPL18900_humanomniexpress-12v1_j_ffpe.csv.gz 69.0 Mb (ftp)(http) CSV

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