|
| Status |
Public on Jun 18, 2015 |
| Title |
K02_13E |
| Sample type |
genomic |
| |
|
| Source name |
Renal Cell Carcinoma
|
| Organism |
Homo sapiens |
| Characteristics |
sampletype: E
ChIP: HumanOmniExFFPE-12,v1.0
Stage: IV
grade: Epithelioid
pretreatment: None
position on chip: R03C02
|
| Treatment protocol |
N/A
|
| Growth protocol |
N/A
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Epicentre MasterPure Complete DNA and RNA Purification Kit
|
| Label |
biotin
|
| Label protocol |
Illumina Infinium HD FFPE Protocol
|
| |
|
| Hybridization protocol |
Illumina Infinium HD FFPE Protocol
|
| Scan protocol |
Illumina iScan Infinium NXT
|
| Data processing |
Log R Ratio for copy number were obtained using Illumina GenomeStudio 2011.1 software.
|
| |
|
| Submission date |
Jul 09, 2014 |
| Last update date |
Jun 18, 2015 |
| Contact name |
Kanishka Sircar |
| E-mail(s) |
ksircar@mdanderson.org
|
| Organization name |
MD Anderson Cancer Center
|
| Street address |
1515 Holcombe Blvd., G1.3623
|
| City |
Houston |
| State/province |
TX |
| ZIP/Postal code |
77030 |
| Country |
USA |
| |
|
| Platform ID |
GPL18900 |
| Series (2) |
| GSE59265 |
Genome wide DNA copy number analysis of sarcomatoid renal cell carcinoma. |
| GSE59266 |
Genome wide analysis of sarcomatoid and non-sarcomatoid clear cell renal cell carcinoma |
|
