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Platform GPL30414 Query DataSets for GPL30414
Status Public on Jul 21, 2021
Title LAM Subarray 63 - Antigens 10/22/2017
Technology type spotted peptide or protein
Distribution non-commercial
Organism synthetic construct
Manufacturer Todd Lowary, University of Alberta and Engineering Arts Tempe Arizona
Manufacture protocol Microarray slides were printed at Engineering Arts LLC (Phoenix, AZ). BSA conjugates were noncontact printed on Schott type E slides (Schott North America, Inc., Elmsford, NY) using an Engineering Arts au301 Rainmaker microarray printer and dispensed at 100 μg/mL in buffer (1:10 phosphate-buffered saline plus 0.005% vol/vol Triton X-100). Antigens were dispensed at 360 pL per spot to produce 140- to 160-m diameter spots in triplicate. Relative humidity was maintained at 65%; slides were subjected to white light for 100% inline drop inspection. Printing was carried out in a HEPA-filtered environment at room temperature. Printed slides were stored at –20 °C until use. Each slide contains 24 identical array containing 30 components printed in duplicate.
 
Description NA - Synthetic antigens coupled to bovine serum albumin
 
Submission date Jul 20, 2021
Last update date Jul 21, 2021
Contact name Jacqueline Achkar
E-mail(s) jacqueline.achkar@einsteinmed.org
Phone 7184302971
Organization name Albert Einstein College of Medicine
Street address 1300 Morris Park Ave.
City Bronx
ZIP/Postal code 10461
Country USA
 
Samples (543) GSM5464177, GSM5464178, GSM5464179, GSM7792590, GSM7792591, GSM7792592 
Series (4)
GSE180517 Human monoclonal antibodies to M. tuberculosis arabinomannan recognize distinct glycan epitopes - implications for TB diagnostics and research
GSE243658 Mucosal and systemic antigen-specific antibody responses correlate with protection against active tuberculosis in nonhuman primates (LAM63 IgA)
GSE243659 Mucosal and systemic antigen-specific antibody responses correlate with protection against active tuberculosis in nonhuman primates (LAM63 IgG)

Data table header descriptions
ID
SPOT_ID
SAMPLE NUMBER
Structure
Linker
Loading on BSA

Data table
ID SPOT_ID SAMPLE NUMBER Structure Linker Loading on BSA
1 S#1 YB-8-099 beta-D-Araf-(1?2)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-8?-aminooctyl Squarate 13.9
2 S#2 YB-8-101 alpha-D-Manp-(1?5)-beta-D-Araf-(1?2)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-8?-aminooctyl Squarate 14.1
3 S#3 YB-8-111 alpha-D-Manp-(1?2)-alpha-D-Manp-(1?5)-beta-D-Araf-(1?2)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-8?-aminooctyl Squarate 11.1
4 S#4 YB-8-113 alpha-D-Manp-(1?2)-alpha-D-Manp-(1?2)-alpha-D-Manp-(1?5)-beta-D-Araf-(1?2)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-8?-aminooctyl Squarate 11.6
5 S#5 YB-8-123 alpha-D-Manp-(1?5)-beta-D-Araf-(1?2)-alpha-D-Araf-(1?3)-[alpha-D-Manp-(1?5)-beta-D-Araf-(1?2)-alpha-D-Araf-(1?5)]-alpha-D-Araf-(1?5)-alpha-D-Araf-8?-aminooctyl Squarate 11.6
6 S#6 YB-8-125 alpha-D-Manp-(1?2)-alpha-D-Manp-(1?5)-beta-D-Araf-(1?2)-alpha-D-Araf-(1?3)-[alpha-D-Manp-(1?2)-alpha-D-Manp-(1?5)-beta-D-Araf-(1?2)-alpha-D-Araf-(1?5)]-alpha-D-Araf-(1?5)-alpha-D-Araf-8?-aminooctyl Squarate 11.8
7 S#7 YB-8-133 5-deoxy-5-thiomethyl-alpha-D-Xylf-(1?4)-alpha-D-Manp-(1?2)-alpha-D-Manp-(1?5)-beta-D-Araf-(1?2)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-8?-aminooctyl Squarate 11.3
8 S#8 YB-8-141 5-deoxy-5-thiomethyl-alpha-D-Xylf-(1?4)-alpha-D-Manp-(1?5)-beta-D-Araf-(1?2)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-8?-aminooctyl Squarate 10.7
9 S#9 YB-8-143 5-deoxy-5-thiomethyl-alpha-D-Xylf-(1?4)-alpha-D-Manp-(1?2)-alpha-D-Manp-(1?2)-alpha-D-Manp-(1?5)-beta-D-Araf-(1?2)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-8?-aminooctyl Squarate 8.2
10 S#10 YB-8-149 beta-D-Araf-(1?2)-alpha-D-Araf-(1?3)-[5-deoxy-5-thiomethyl-alpha-D-Xylf-(1?4)-alpha-D-Manp-(1?5)-beta-D-Araf-(1?2)-alpha-D-Araf-(1?5)]-alpha-D-Araf-(1?5)-alpha-D-Araf-8?-aminooctyl Squarate 12.7
11 S#11 YB-8-151 5-deoxy-5-thiomethyl-alpha-D-Xylf-(1?4)-alpha-D-Manp-(1?5)-beta-D-Araf-(1?2)-alpha-D-Araf-(1?3)-[beta-D-Araf-(1?2)-alpha-D-Araf-(1?5)]-alpha-D-Araf-(1?5)-alpha-D-Araf-8?-aminooctyl Squarate 9.3
12 S#12 YB-11-151 alpha-D-Manp-(1?5)-[beta-D-Araf-(1?2)]-alpha-D-Araf-(1?5)-[alpha-D-Manp-(1?5)-[beta-D-Araf-(1?2)]-alpha-D-Araf-(1?3)]-alpha-D-Araf-(1?5)-alpha-D-Araf-8?-aminooctyl Squarate 14.9
13 S#13 YB-BSA-01 8-Trifluoroacetamidooctyl-alpha-D-Glcp-(1?6)-alpha-D-Glcp-(1?4)-alpha-D-Glcp Squarate 3.7
14 S#14 YB-BSA-02 8-Trifluoroacetamidooctyl-alpha-D-Glcp-(1?4)-alpha-D-Glcp-(1?6)-alpha-D-Glcp-(1?4)-alpha-D-Glcp Squarate 4
15 S#15 YB-BSA-03 beta-D-Araf-(1?2)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-8?-aminooctyl Squarate 8.2
16 S#16 YB-BSA-04 beta-D-Araf-(1?2)-alpha-D-Araf-(1?3)-[beta-D-Araf-(1?2)-alpha-D-Araf-(1?5)]-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-8?-aminooctyl Squarate 7.5
17 S#17 YB-BSA-05 alpha-D-Manp-(1?6)-[alpha-D-Manp-(1?3)]-alpha-D-Manp-(1?6)-alpha-D-Manp-8?-aminooctyl Squarate 20.7
18 S#18 YB-BSA-06 beta-D-Araf-(1?2)-alpha-D-Araf-(1?3)-[beta-D-Araf-(1?2)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)]-alpha-D-Araf-(1?5)-alpha-D-Araf-8?-aminooctyl Squarate 6.7
19 S#19 YB-BSA-07 alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-[alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?3)]-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-8?-aminooctyl Squarate 2.3
20 S#20 YB-BSA-08 beta-D-Araf-(1?2)-alpha-D-Araf-(1?3)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-alpha-D-Araf-(1?5)-[beta-D-Araf-(1?2)-alpha-D-Araf-(1?5)]-alpha-D-Araf-(1?5)-alpha-D-Araf-8?-aminooctyl Squarate 4.5

Total number of rows: 63

Table truncated, full table size 10 Kbytes.




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