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Platform GPL33776 Query DataSets for GPL33776
Status Public on Nov 08, 2023
Title RT² Profiler PCR Array Human Type I Interferon Response (custom)
Technology type RT-PCR
Distribution virtual
Organism Homo sapiens
Manufacturer Qiagen
Manufacture protocol See manufacturer's website
Catalog number CAPH13839-PAHS-016Z 
 
Description Human Type I Interferon Response PCR array customised to include the selected human housekeeipng genes
Qiagen RT² Profiler panel of PCR assays.
 
Submission date Sep 20, 2023
Last update date Nov 09, 2023
Contact name Virginie Doceul
E-mail(s) virginie.doceul@vet-alfort.fr
Organization name UMR VIROLOGIE INRAE-ANSES-ENVA
Street address 7 avenue du Général de Gaulle
City Maisons-Alfort
ZIP/Postal code 94700
Country France
 
Samples (32) GSM7796987, GSM7796988, GSM7796989, GSM7796990, GSM7796991, GSM7796992 
Series (3)
GSE243855 Real-time quantitative PCR analysis of human HepaRG cells infected with hepatitis E virus (HEV) [pre-array]
GSE243856 Real-time quantitative PCR analysis of human HepaRG cells infected with hepatitis E virus (HEV) [D100 plaque 1]
GSE243864 Real-time quantitative PCR analysis of liver tissue from pigs infected experimentally with hepatitis E virus (HEV)

Data table header descriptions
ID
Unigene UniGene cluster ID
GB_ACC GenBank Accession number
Symbol Gene symbol
Description Gene description
Gname Gene name

Data table
ID Unigene GB_ACC Symbol Description Gname
A01 Hs.12341 NM_001111 ADAR Adenosine deaminase, RNA-specific ADAR1/AGS6/DRADA/DSH/DSRAD/G1P1/IFI-4/IFI4/K88DSRBP/P136
A02 Hs.523309 NM_004281 BAG3 BCL2-associated athanogene 3 BAG-3/BIS/CAIR-1/MFM6
A03 Hs.118110 NM_004335 BST2 Bone marrow stromal cell antigen 2 CD317/TETHERIN
A04 Hs.2490 NM_033292 CASP1 Caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase) ICE/IL1BC/P45
A05 Hs.74034 NM_001753 CAV1 Caveolin 1, caveolae protein, 22kDa BSCL3/CGL3/LCCNS/MSTP085/PPH3/VIP21
A06 Hs.303649 NM_002982 CCL2 Chemokine (C-C motif) ligand 2 GDCF-2/HC11/HSMCR30/MCAF/MCP-1/MCP1/SCYA2/SMC-CF
A07 Hs.514821 NM_002985 CCL5 Chemokine (C-C motif) ligand 5 D17S136E/RANTES/SCYA5/SIS-delta/SISd/TCP228/eoCP
A08 Hs.501497 NM_001252 CD70 CD70 molecule CD27L/CD27LG/TNFSF7
A09 Hs.838 NM_005191 CD80 CD80 molecule B7/B7-1/B7.1/BB1/CD28LG/CD28LG1/LAB7
A10 Hs.171182 NM_006889 CD86 CD86 molecule B7-2/B7.2/B70/CD28LG2/LAB72
A11 Hs.238990 NM_004064 CDKN1B Cyclin-dependent kinase inhibitor 1B (p27, Kip1) CDKN4/KIP1/MEN1B/MEN4/P27KIP1
A12 Hs.701991 NM_000246 CIITA Class II, major histocompatibility complex, transactivator C2TA/CIITAIV/MHC2TA/NLRA
B01 Hs.709456 NM_000567 CRP C-reactive protein, pentraxin-related PTX1
B02 Hs.632586 NM_001565 CXCL10 Chemokine (C-X-C motif) ligand 10 C7/IFI10/INP10/IP-10/SCYB10/crg-2/gIP-10/mob-1
B03 Hs.190622 NM_014314 DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 RIG-I/RIGI/RLR-1/SGMRT2
B04 Hs.131431 NM_002759 EIF2AK2 Eukaryotic translation initiation factor 2-alpha kinase 2 EIF2AK1/PKR/PPP1R83/PRKR
B05 Hs.62661 NM_002053 GBP1 Guanylate binding protein 1, interferon-inducible -
B06 Hs.181244 NM_002116 HLA-A Major histocompatibility complex, class I, A HLAA
B07 Hs.77961 NM_005514 HLA-B Major histocompatibility complex, class I, B AS/HLAB/SPDA1
B08 Hs.650174 NM_005516 HLA-E Major histocompatibility complex, class I, E EA1.2/EA2.1/HLA-6.2/MHC/QA1

Total number of rows: 91

Table truncated, full table size 8 Kbytes.




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