|
| Status |
Public on Jul 29, 2018 |
| Title |
Genome-wide maps of histone H3 acetylation (H3Ac) in wild type (WT; Columbia-0; Col) and hag1 calli |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Genome-wide histone H3Ac maps of WT and hag1 calli were generated by chromatin immunoprecipitation (ChIP) followed by high-throughput DNA sequencing (ChIP seq) to understand the role of HAG1 in the reprogramming of the epigenome during callus formation.
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| |
|
| Overall design |
Examination of H3Ac levels in WT and hag1 calli.
|
| |
|
| Contributor(s) |
Noh Y, Noh B, Kim J, Yang W |
| Citation(s) |
30061313 |
| Submission date |
Jul 09, 2017 |
| Last update date |
Jul 25, 2021 |
| Contact name |
Jiyun Kim |
| Organization name |
HHU
|
| Department |
Biology
|
| Lab |
Institute of Molecular Physiology
|
| Street address |
Universitätsstr. 1
|
| City |
Düsseldorf |
| ZIP/Postal code |
40225 |
| Country |
Germany |
| |
|
| Platforms (1) |
| GPL13222 |
Illumina HiSeq 2000 (Arabidopsis thaliana) |
|
| Samples (4)
|
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| This SubSeries is part of SuperSeries: |
| GSE100967 |
Acquisition of Pluripotency by HAG1-mediated Epigenetic Reprogramming of Key Potency Factor-encoding Loci in Arabidopsis |
|
| Relations |
| BioProject |
PRJNA393560 |
| SRA |
SRP111397 |
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