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Series GSE103054 Query DataSets for GSE103054
Status Public on Aug 24, 2018
Title AUXIN RESPONSE FACTOR3 Integrates the Functions of AGAMOUS and Auxin to Repress Cytokinin Biosynthesis and Signaling in Floral Meristem Determinacy
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary Successful floral meristem (FM) determinacy is critical for the subsequent reproductive development and life cycle. Although phytohormones cytokinin and auxin interact to coordinately regulate many aspects of plant development, whether, if so how, cytokinin and auxin function in FM determinacy remain unclear. Here we show that the homeostasis of cytokinin is critical for the FM determinacy. Auxin promotes the expression of AUXIN RESPONSE FACTOR3 (ARF3) to repress cytokinin activity in FM determinacy. We found that ARF3 represses the expression of the ISOPENTENYLTRANSFERASE (IPT) family genes directly and the LONELY GUY (LOG) family genes indirectly, whose products are enzymes required for cytokinin biosynthesis. Furthermore, ARF3 directly inhibits the expression of ARABIDOPSIS HISTIDINE KINASE4 (AHK4), one of cytokinin receptor genes, to depress cytokinin activity. Genome-Wide Transcriptional Profiling reveals multiple functions of ARF3 in flower development. Consequently, ARF3 controls cell division by regulating cell cycle genes expression through cytokinin. Eventually, we show that AGAMOUS (AG) dynamically regulates the expression of ARF3 and IPTs resulting in coordinated regulation of FM maintenance and termination through cell division. Therefore, our findings reveal the molecular linkage between phytohormones auxin/cytokinin and AG in FM determinacy and shed light on the mechanisms of FM maintenance and termination.
 
Overall design mRNA profiles of inflorescences containing stage 6 and younger flowers of ARF3:ARF3-GR arf3-29 treated with DMSO or DEX
 
Contributor(s) Liu X
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Submission date Aug 24, 2017
Last update date May 15, 2019
Contact name Renyi Liu
E-mail(s) rliu.bicomp@gmail.com
Phone 02157078228
Organization name Shanghai Center for Plant Stress Biology
Department Bioinformatics
Street address 3888 Chenhua Road
City Shanghai
State/province Shanghai
ZIP/Postal code 201602
Country China
 
Platforms (1)
GPL13222 Illumina HiSeq 2000 (Arabidopsis thaliana)
Samples (6)
GSM2753072 DMSO-1
GSM2753073 DMSO-2
GSM2753074 DMSO-3
Relations
BioProject PRJNA400052
SRA SRP116111

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Supplementary file Size Download File type/resource
GSE103054_Table.6Ath.RPM.txt.gz 539.7 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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