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Series GSE124282 Query DataSets for GSE124282
Status Public on Dec 22, 2018
Title Primary mid-trimester and term human cytotrophoblast, untreated [RNA-Seq]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We detected a genome-wide differential gene enrichment between mid-trimester and term human placenta. Pathway analysis identified that cytokine-cytokine receptor interaction, NF-κB, and TNF are the leading pathways enriched in term placenta. Our analysis has provided the first-time characterization of the key players of human placental origin with molecular changes across pregnancy, which could drive human labor.
 
Overall design Total RNAs were extracted from 4 individual placentas at either mid-trimester or term pregnancy with use of Trizol method.
 
Contributor(s) Wang B
Citation(s) 30642670
Submission date Dec 21, 2018
Last update date Mar 20, 2019
Contact name Bingbing Wang
E-mail(s) wangbi@rwjms.rutgers.edu
Organization name Rutgers RWJMS
Street address 125 Paterson St Room 2143
City New Brunswick
State/province New Jersey
ZIP/Postal code 08901
Country USA
 
Platforms (1)
GPL17301 Ion Torrent PGM (Homo sapiens)
Samples (8)
GSM3526873 Mid-trimester placenta_rep1 (RNA-seq)
GSM3526874 Mid-trimester placenta_rep2 (RNA-seq)
GSM3526875 Mid-trimester placenta_rep3 (RNA-seq)
Relations
BioProject PRJNA511458
SRA SRP174220

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE124282_Processed_Data_FPKM.txt.gz 724.2 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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