|
Status |
Public on Feb 01, 2021 |
Title |
A first exon termination checkpoint that preferentially suppresses extragenic transcription |
Organisms |
Homo sapiens; Mus musculus |
Experiment type |
Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing
|
Summary |
This SuperSeries is composed of the SubSeries listed below.
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|
|
Overall design |
Refer to individual Series
|
|
|
Citation(s) |
33767452 |
Submission date |
Jun 20, 2019 |
Last update date |
May 03, 2021 |
Contact name |
Viviana Piccolo |
E-mail(s) |
viviana.piccolo@ieo.it
|
Organization name |
European Institute of Oncology (IEO)
|
Department |
Department of Experimental Oncology
|
Lab |
Gioacchino Natoli Lab
|
Street address |
Via Adamello 16
|
City |
Milano |
State/province |
Milano |
ZIP/Postal code |
20139 |
Country |
Italy |
|
|
Platforms (5)
|
GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
Samples (82)
|
|
This SuperSeries is composed of the following SubSeries:
|
GSE133103 |
A first exon termination checkpoint that preferentially suppresses extragenic transcription [ChIP-seq Raw W ZC] |
GSE133104 |
A first exon termination checkpoint that preferentially suppresses extragenic transcription [ChIPseq_BMDM_POLII] |
GSE133105 |
A first exon termination checkpoint that preferentially suppresses extragenic transcription [RNASEQ1_BMDM_4sU] |
GSE133106 |
A first exon termination checkpoint that preferentially suppresses extragenic transcription [RNASEQ_BMDM_polyA] |
GSE133107 |
A first exon termination checkpoint that preferentially suppresses extragenic transcription [RNASEQ_HELA_4sU] |
GSE133139 |
A first exon termination checkpoint that preferentially suppresses extragenic transcription [RNASEQ_HELA_polyA] |
GSE160658 |
A first exon termination checkpoint that preferentially suppresses extragenic transcription [RNASEQ_ZC3H4_C] |
|
Relations |
BioProject |
PRJNA549948 |