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| Status |
Public on Jan 01, 2023 |
| Title |
Monitoring the differential expression of miRNAs, tRNAs and tRFs in lung cancer biopsies. |
| Organism |
Homo sapiens |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
Expression profiling by high throughput sequencing
|
| Summary |
Translational rate has been deregulated in many cancers through small non-coding RNAs aberrations. Herein we focus on miRNAs, tRNAs and tRFs paterns in lung cancer biopsies.
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| Overall design |
We performed semiconductor sequencing with modification of the standard protocol to enrich the tRNAs and tRFs and analyze the data measuring their abundance.
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| Contributor(s) |
Skeparnias I, Anastasakis D, Grafanaki K, Alexopoulos P, Dougenis D, Scorilas A, Kontos C, Stathopoulos C |
| Citation(s) |
33092114 |
| Submission date |
Jan 15, 2020 |
| Last update date |
Apr 03, 2023 |
| Contact name |
Constantinos Stathopoulos |
| E-mail(s) |
cstath@med.upatras.gr
|
| Organization name |
University of Patras
|
| Department |
Department of Biochemistry
|
| Street address |
Asklipiou 1
|
| City |
Patras |
| ZIP/Postal code |
26504 |
| Country |
Greece |
| |
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| Platforms (2) |
| GPL17301 |
Ion Torrent PGM (Homo sapiens) |
| GPL21290 |
Illumina HiSeq 3000 (Homo sapiens) |
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| Samples (19)
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| Relations |
| BioProject |
PRJNA601315 |
| SRA |
SRP242011 |
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