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Series GSE162414 Query DataSets for GSE162414
Status Public on Dec 01, 2023
Title Bulk RNAseq of post-mortem brain tissue of Aicardi-Goutières Syndrome patients and non-diseased controls
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Post mortem brain tissue of three Patients suffering from Aicardi-Goutières Syndrome from different brain regions was used to isolate RNA and perform RNAseq analysis compared to age matched control patients with no underlying brain pathology.
 
Overall design Disease vs control with two AGS patients and two to three control samples for each group and brain region were analysed.
 
Contributor(s) Staszewski O, Prinz M
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Dec 01, 2020
Last update date Dec 01, 2023
Contact name Ori Staszewski
E-mail(s) ori.staszewski@uniklinik-freiburg.de
Organization name University Medical Center Freiburg
Department Institute of Neuropathology
Street address Breisacher Str. 64
City Freiburg
ZIP/Postal code D-79106
Country Germany
 
Platforms (1)
GPL15433 Illumina HiSeq 1000 (Homo sapiens)
Samples (18)
GSM4951217 C_ctrl_01_162C
GSM4951218 C_ctrl_02_350C
GSM4951219 C_TREX1_03_480C
Relations
BioProject PRJNA681821
SRA SRP295339

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE162414_counts.tsv.gz 5.4 Mb (ftp)(http) TSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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