GEO Accession viewer

GSE38100	Examination of gene expression in wild type and USP49 knockdown cells [RNA-Seq]
GSE38101	USP49 deubiquitinates histone H2B and regulates pre-mRNA splicing
GSE38901	HSF1 drives a transcriptional program distinct from heat shock to support highly malignant human cancers [ChIP-Seq]
GSE38912	HSF1 drives a transcriptional program distinct from heat shock to support highly malignant human cancers
GSE41343	Genome-wide DNA methylation profiles of non-small cell lung carcinomas and control lung tissues
GSE43119	The enhancer and promoter landscape of human regulatory and conventional T cell subpopulations
GSE43512	Epigenetic conservation at gene regulatory elements revealed by non-methylated DNA profiling in seven vertebrates
GSE44379	Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates (part 4)
GSE44404	Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates
GSE48003	RNA-seq of RNase R treated poly(A)-/ribo- RNAs from H9 cells
GSE49651	Nucleosome Positioning and Histone Modifications Define Relationships between Regulatory Elements and Nearby Gene Expression in Breast Epithelial Cells
GSE51861	RNA-seq (Illumina and PacBio) of hESC
GSE52036	RNA-seq analysis reveals endogenous aryl hydrocarbon receptor regulation is highly associated with eicosanoid synthesis and tumor necrosis factor activity in MCF-7 cancer cells
GSE52201	Lysine-Specific Demethylase 1 Has Dual Functions as a Major Regulator of Androgen Receptor Transcriptional Activity
GSE53239	RNA-sequencing of the brain transcriptome implicates dysregulation of neuroplasticity, circadian rhythms, and GTPase binding in bipolar disorder
GSE53258	The role of TFEB in retinoid induced differentiation of NB4 APL leukemic cells (shTFEB)
GSE53259	Retinoid induced differentiation of NB4 APL leukemic cells
GSE54634	ChIP-seq mapping of histone modifications in CD14++ CD16- monocytes from human blood samples
GSE55062	Therapeutic Targeting of BET Bromodomain Proteins in Castration-Resistant Prostate Cancer (ChIP-Seq)
GSE55064	Therapeutic Targeting of BET Bromodomain Proteins in Castration-Resistant Prostate Cancer
GSE55193	Energy Metabolism during Anchorage-Independence
GSE55271	Major and Minor Group Human Rhinovirus Response in Human Macrophages
GSE55502	Unique cell cycle-dependent variations in the pluripotent epigenetic landscape define novel cohorts of temporal expressed bivalent genes during hESCs differentiation
GSE56545	mRNA profiling of Hepatocellular carcinoma (HCC)
GSE56774	Widespread contribution of transposable elements to the innovation of gene regulatory networks [human ENCODE]
GSE60945	Resetting Transcription Factor Control Circuitry Towards Ground State Pluripotency In Human
GSE61220	Analysis Of The TGFb-Induced Program In Primary Airway Epithelial Cells Shows Essential Role Of NF-kB/RelA Signaling Network In Type II Epithelial Mesenchymal Transition
GSE63144	CX3CR1/Fractalkine receptor expression separates memory CD8+ T cells with distinct functional profiles (RNA-seq)
GSE63147	CX3CR1/Fractalkine receptor expression separates memory CD8+ T cells with distinct functional profiles
GSE63255	Genome-wide analysis of the RNA polyemerase I trascription factor UBF1/2 binding in mouse and human cell lines.
GSE63966	Differential susceptibility of human pleural and peritoneal mesothelial cells to asbestos exposure
GSE64843	Human Corneal microRNA Expression Profile in Fungal Keratitis
GSE66378	Disruptions of Topological Chromatin Domains Causes Pathogenic Rewiring of Gene-Enhancer Interactions [4C-Seq-human]
GSE66383	Disruptions of Topological Chromatin Domains Causes Pathogenic Rewiring of Gene-Enhancer Interactions
GSE66550	Efficient and quantitative high-throughput tRNA sequencing
GSE70181	Comparison of Hi-C results using in-solution versus in-nucleus ligation
GSE72962	microRNA profiles in Parkinson’s disease prefrontal cortex
GSE73931	Aberrant blood DNA methylation reveals reproductive hormone imbalances in firefighters
GSE74162	genome-wide profiling of microRNA in PTSD with comorbid depression (PTSD&Dep)
GSE74729	A novel RAF kinase inhibitor with DFG-out binding mode: high efficacy in BRAF-mutant tumor xenograft models in the absence of normal tissue hyperproliferation
GSE75956	HeLa transcriptome induction by IFN gamma and indoleamine 2,3-dioxygenase (IDO)
GSE76433	p53 deficiency linked to BTG2 loss enhances metastatic potential by promoting tumor growth in primary and metastatic sites in PDX models of triple negative breast cancer
GSE76434	tRNA Modification Identification and Quantification through High Throughput Sequencing
GSE76626	Characterization of EZH2-deficient human embryonic stem cells [ChIP-seq and bulk RNA-seq]
GSE76978	A faithful in vivo model of human MLL-AF4 proB acute lymphoblastic leukemia
GSE77140	Gene expression profiles of rescue with wild type or SUMO double mutant TRIM24
GSE77383	Transcriptomic profiling discloses molecular and cellular events related to neuronal differentiation in SH-SY5Y cells
GSE79463	NR2E3 gene networks are associated with AHR signaling pathways
GSE80361	Transcriptome profile of HepG2-expressing ATP7B-H1069Q (liver hepatocellular cells) exposed to JNK or p38 Inhibitor
GSE81084	FOXO1 is an oncogenic mediator in AML1-ETO leukemia
GSE81674	Characterisation of EZH2-deficient human embryonic stem cells
GSE81879	Hi-C As A New Tool For Precise Detection And Characterization Of Chromosomal Rearrangements And Copy Number Variation In Human Tumors
GSE83245	The rectal mucosal transcriptome of men who have sex with men (MSM) engaging in condomless receptive anal intercourse (CRAI) compared with men who have never engaged in anal intercourse (controls)
GSE84306	Comprehensive microRNA-sequencing of small extracellular vesicles derived from head and neck carcinoma cells reveals common secretion profiles
GSE84582	Global gene expression profiles of cardiac progenitors differentiated from human pluripotent stem cells in 3D culture under simulated microgravity
GSE85870	Global loss of epigenetic and transcriptional fidility defines a subclass of cancer with immunotherapy resistance
GSE85984	RNA sequencing of skeletal muscle of myotonic dystrophic (DM1) patients
GSE89017	Genome-wide analysis of 8-oxoguanine DNA glycosylase-1 after oxidative stress exposure
GSE89443	RNA Seq analysis of NKX2-5 Null and Het human embryonic stem cells in cardiomyogenesis
GSE89457	ChIP Seq with NKX2-5 antibody in human embryonic stem cells in cardiomyogenesis
GSE90639	Transcriptome-wide identification of IGF2BP binding RNAs by RIP-seq.
GSE90642	Profiling of N6-Adenosine (m6A) Methylation in HepG2 cells
GSE90684	IGF2BP proteins Enhance mRNA stability
GSE90686	Recognition of RNA N6-methyadenosine by IGF2BP proteins Enhances mRNA Stability
GSE92506	Time series RNA profiling of endotheilal cells in response to atheroprone and atheroprotective flows
GSE96590	Different Temporal Effects of Ebola Virus VP35 and VP24 Proteins on Global Gene Expression in Human Dendritic Cells
GSE97443	RNA-seq in acute myeloid leukemia (AML) cells with and without knockdown of METTL14
GSE97668	Rhinovirus infection results in stronger and more persistent genomic dysregulation: evidence for altered innate immune response in asthmatics at baseline, early in infection, and during convalescence
GSE98247	Transcriptome profile of a stable clone overexpressing TFEB in HEK293 cells by TET-OFF system (HEK293-PFL-TFEB).
GSE98248	TFEB in HEK293 cells by TET-OFF system (HEK293-PFL-TFEB).
GSE98797	Chronophin regulates metabolic and transcriptomic features of glioblastoma stem-like cells
GSE98834	The expression of genes encoding palmitoylated proteins in axonal and synaptic compartments is affected in CLN1/PPT1 transfected neuronal cells
GSE99407	Mapping PRDM9 binding and its effects in transfected HEK293T cells
GSE100720	The promoter interactome of cardiomyocytes differentiated from human embryonic stem cells links regulatory elements to cardiac gene promoters
GSE101480	Targeted inhibition of STAT/TET1 axis as a potent therapeutic strategy for acute myeloid leukemia
GSE102228	Use of RNA sequencing to assess the expression patterns of microbial metabolite transporters present in children post-transplant with and without GVHD
GSE102246	mTOR kinase inhibition effectively decreases progression of a subset of neuroendocrine tumors that progress on rapalog therapy and delays cardiac impairment
GSE102570	Queuosine modification protects cognate tRNAs against ribonuclease cleavage
GSE103143	The mechanism of HHT in treating acute myeloid leukemia on RNA level.
GSE103494	RNA seq with AML cells (NB4) upon FTO knockdown
GSE103495	RNA seq with AML (NB4) cells upon FTO inhibition
GSE103497	RNA-seq and m6A-seq of AML cells with FTO knockdown or inhibition
GSE103792	A Suv39H1-low chromatin state drives migratory cell populations in cervical cancer [RNA-Seq]
GSE103794	A Suv39H1-low chromatin state drives migratory cell populations in cervical cancer
GSE104853	MicroRNA-125a-5p overexpression in human macrophages
GSE106601	tRNA modification landscape selectively controls mitochondrial translation efficiency in MERRF
GSE106695	GRHL2 is a key lineage determining factor which collaborates with FOXA1 to establish a targetable collateral pathway in the setting of endocrine therapy-resistant breast cancer
GSE107047	Natural Killer cells control tumor growth by sensing a growth factor
GSE108167	GRHL2 is a key lineage determining factor which collaborates with FOXA1 to establish a targetable collateral pathway in the setting of endocrine therapy-resistant breast cancer [DNase hypersensitivity]
GSE110495	Therapeutic targeting of the pre-metastatic stage in human brain metastasis
GSE110716	RNA-seq of brain tissue from Parkinson's disease patients [coding exome RNA-seq]
GSE110717	RNA-seq of cultured cells derived from Parkinson's disease patients [PolyA RNA-seq]
GSE110718	Reduced representation bisulfite sequencing (RRBS) of cultured cells derived from Parkinson's disease patient [RRBS-seq]
GSE110719	Small RNA profiling from cultured cells and tissues derived from Parkinson's disease patient [small RNA-seq]
GSE110720	RNA-seq, RRBS-seq and miRNA-seq study of Parkinson's disease patients
GSE111786	Impact of shRNA-mediated KLF4 down-modulation on the transcriptome profile of human keratinocyte precursor cells
GSE113829	MICRO-RNA AS BIOMARKERS IN POMPE DISEASE
GSE114900	Nucleosomes stabilize ssRNA-dsDNA triple helices in human cells
GSE117543	Low cytosolic folate cycling is a hallmark of U251 glioblastoma cells reprogramming towards pluripotency [RNA-seq]
GSE117544	Low cytosolic folate cycling is a hallmark of U251 glioblastoma cells reprogramming towards pluripotency
GSE118077	The long non-coding RNA LINC00941 and SPRR5 are novel regulators of human epidermal homeostasis
GSE118944	RNA-Seq of CD34+ Bone Marrow Progenitors from Healthy Donors
GSE119678	Defective transcription elongation in a subset of cancers confers immunotherapy resistance (human cell lines RNA-Seq)
GSE119679	Defective transcription elongation in a subset of cancers confers immunotherapy resistance
GSE122621	Comparability of the small RNA secretome across human biofluids concomitantly collected from healthy adults
GSE124381	Innate-like activation of mucosal-associated invariant T cells in mycobacterial infection
GSE125512	Intracerebral Hemorrhage Induces Inflammatory Gene Expression in Peripheral Blood: Global Transcriptional Profiling in ICH Patients
GSE126592	Identification of small RNAs interacting with LARP7
GSE126593	RiboMeth-Seq analysis of purified U6 and U2 snRNAs
GSE126911	The Alazami Syndrome-associated protein LARP7 guides U6 small nuclear RNA modification and contributes to splicing robustness
GSE128834	The hematopoietic master transcription factor PU.1 requires its interaction with the SWI/SNF remodeler to access chromatin de novo [ChIP-seq]
GSE128836	The hematopoietic master transcription factor PU.1 requires its interaction with the SWI/SNF remodeler to access chromatin de novo [RNA-seq]
GSE128837	The hematopoietic master transcription factor PU.1 requires its interaction with the SWI/SNF remodeler to access chromatin de novo
GSE128847	The Long-Form Hypoxia-Inducible Factor 3 Is a Transcription Activator that Regulates Erythropoietin Signaling
GSE129491	HIF-3α2 overexpression ChIP-seq in Hep3B cells and 1 % hypoxia
GSE130323	Actin-induced Endothelial Injury After Hematopoietic Stem Cell Transplant and Impact on Clinical Outcomes
GSE130784	Ultra-High Throughput Single Cell Analysis of Proteins and RNAs by Split-pool Synthesis
GSE132082	RNA-seq of tumor cells following angiopellosis extravasation
GSE133001	The effect of metals on human prostaspheres derived from an immortalized human prostate epithelial cell line RWPE-1 cells
GSE133780	Transcriptome analysis of gene expression in A549 cell by Regulation of HOXC8 expression
GSE134979	Activation of Interferon and Complement Pathways in Thrombotic Microangiopathy
GSE135076	Deciphering protective mechanism against human type 2 diabetes through in vitro β cell differentiation
GSE135579	Next Generation Sequencing Facilitates Quantitative Analysis of HePG2i cell line with and without DOX induced GATA4 expression Transcriptomes
GSE137053	Identification of circular RNAs during colorectal cancer progression and metastasis using a preclinical mouse model during LDM topotecan chemotherapy
GSE137939	Rescuing over-activated microglia by acetaminophen treatment restores cognitive performance in the Dp(16) mouse model of Down syndrome.
GSE138269	Sequencing of patient tumor samples and cancer cell lines for endotype identification in multiple cancer types
GSE139028	RNA-seq analysis on tissues derived from normal skin and burn eschar
GSE140226	Dexamethasone inhibits respiratory syncytial virus-driven mucus production while increasing viral replication without altering antiviral interferon signaling
GSE140926	RNA-seq analysis on pericytes derived from normal skin and burn eschar compared to human skin-derived fibroblasts
GSE144633	Tissue responses to Shiga toxin in human intestinal organoids
GSE145078	MicroRNA sequencing in ARCaPE and ARCaPM cells
GSE147657	Transcriptional Profiling Uncovers Human Hyalocytes as a Unique Innate Immune Cell Population
GSE156729	High-throughput sequencing of OS cells treated with activated compound B5.
GSE157343	Transcriptome analysis of gene expression in MCF-7 cell upon circFAT1(e2) depletion
GSE162230	RNA sequencing of ETV6-NCOA2 expression in CD34 positive cord blood cells
GSE162338	ETV6-NCOA2 expression in CD34 positive cord blood cells
GSE162414	Bulk RNAseq of post-mortem brain tissue of Aicardi-Goutières Syndrome patients and non-diseased controls
GSE163076	Identification of circular RNA and miRNAs during colorectal cancer progression and metastasis
GSE163546	Histone modifications form a cell-type-specific chromosomal bar code that persists through the cell cycle
GSE166098	HMGN5, an RNA and Nucleosome binding protein required for chromatin de-condensation and gene activation [ChIP-seq]
GSE166101	HMGN5, an RNA and Nucleosome binding protein required for chromatin de-condensation and gene activation [CLIP-seq]
GSE166103	HMGN5, an RNA and Nucleosome binding protein required for chromatin de-condensation and gene activation
GSE171532	Alteration in the transcriptome of lung resident fibroblast isolated from fibrotic lungs of IPF upon genetic knockdown of SOX9
GSE178745	IL-6 promotes drug resistance through formation of polyploid giant cancer cells and stromal fibroblast reprogramming
GSE179568	In-depth molecular characterization of neovascular membranes suggests a role for hyalocytes-to-myofibroblasts transdifferentiation in proliferative diabetic retinopathy
GSE179603	Transcriptional Characterisation of Proliferative Vitreoretinopathy
GSE180273	Global mapping of the macrophage-HIV-1 transcriptome reveals that productive infection induces remodeling of the host cell DNA and chromatin
GSE200489	Comprehensive microRNA-sequencing of small extracellular vesicles from early-stage HNSCC cases and cancer-free controls with benign neoplastic conditions
GSE200998	Complete transcriptome analysis of gene expression in colorectal cancer cells treated with β-elemene
GSE202700	Impact of shRNA-mediated MXD4/MAD4 down-modulation on the transcriptome profile of human keratinocyte precursor cells
GSE202786	Comprehensive microRNA-sequencing of small extracellular vesicles derived from HPV-positive head and neck carcinoma cells
GSE211095	Identification and interrogation of the gene regulatory network of CEBPA double mutant Acute Myeloid Leukaemia
GSE211158	Transcriptome networks identify susceptibility to frequent asthma exacerbations
GSE212104	Identification and interrogation of the gene regulatory network of CEBPA double mutant Acute Myeloid Leukaemia [Promoter capture HiC]
GSE213911	Loss of tight junctions disrupts gastrulation patterning and increases differentiation towards the germ cell lineage in human pluripotent stem cells
GSE215254	A comparison between novel 3D human renal proximal tubule organoids and 2D monolayer cells utilizing RPTEC-TERT1 cells
GSE226192	Development and Validation of a Comprehensive Analysis of the Competing Endogenous CircRNA/miRNA/mRNA Network for Identification of Immune-Related Therapeutic Targets in Esophageal Squamous Cell Carcinoma
GSE228089	Comparative transcriptomes reveal pro-survival and cytotoxic programs of mucosal-associated invariant T cells upon Bacillus Calmette–Guérin stimulation
GSE242706	A human alveolus-on-chip model for radiation induced lung injury
GSE242840	A human alveolus-on-chip model for studying radiation induced lung injury
GSE244209	INPP5D/SHIP1 regulates inflammasome activation in human microglia
GSE256035	TIM-3, LAG-3, or 2B4 gene disruptions increase the anti-tumor response of engineered T cells