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| Status |
Public on Dec 07, 2021 |
| Title |
Genome-wide bisulfite sequencing (Xmal-RRBS) of 50 breast cancer samples for jointly using with NGS and chromosomal microarray data |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by high throughput sequencing
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| Summary |
To study the fundamental basics of patterning abnormal methylation we conducted a complex of genome-wide studies, including Xmal-RRBS on 50 breast cancer samples
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| Overall design |
Reduced representation bisulfite sequencing by XmaI-RRBS (Tanas et al., 2017)
Please note that the numerical values from 0 to 4 (in the characteristics columns) represents category according to TNM staging system of Malignant Tumors. T category describes the primary tumor site and size, N category describes the regional lymph node involvement and M category describes the presence or otherwise of distant metastatic spread.
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| Contributor(s) |
Kalinkin AI, Tanas AS, Strelnikov VV |
| Citation missing |
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| BioProject |
PRJNA784317 |
| Submission date |
Dec 03, 2021 |
| Last update date |
Dec 09, 2021 |
| Contact name |
Alexey Igorevich Kalinkin |
| E-mail(s) |
alexeika2@yandex.ru
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| Organization name |
RCMG
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| Department |
Epigenetics
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| Street address |
Moskvorechie st., 1
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| City |
Moscow |
| State/province |
Russia |
| ZIP/Postal code |
115478 |
| Country |
Russia |
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| Platforms (1) |
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| Samples (50)
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