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Series GSE197288 Query DataSets for GSE197288
Status Public on Dec 31, 2023
Title Genotyping of Malignant Pleural Mesothelioma primary cell lines by SNP array
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
SNP genotyping by SNP array
Summary SNP array data from 45 cell lines of Malignant Pleural Mesothelioma were used to explore recurrent copy number alterations.
This study was part of Cartes d'Identité des Tumeurs (CIT) project from the french Ligue Nationale Contre le Cancer.
 
Overall design 45 primary cell lines of Malignant Pleural Mesothelioma were analyzed with Illumina HumanOmniExpress-24 v1.0 BeadChip SNP arrays.
 
Contributor(s) Blum Y, Meiller C, de Reyniès A, Jean D
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Feb 23, 2022
Last update date Jan 01, 2024
Contact name Sandrine Imbeaud
E-mail(s) sandrine.imbeaud@inserm.fr
Organization name Centre de Recherche des Cordeliers
Department INSERM UMRS1138-EQUIPE 28, Sorbonne Université-Inserm-Université de Paris
Lab FUNctional GEnomics of Solid Tumors - FunGeST
Street address 15 rue de l'Ecole de Médecine
City Paris
ZIP/Postal code 75006
Country France
 
Platforms (1)
GPL21168 HumanOmniExpress-24 v1.0 BeadChip [SNP_ID version]
Samples (45)
GSM5912661 Malignant Pleural Mesothelioma cell line 01
GSM5912662 Malignant Pleural Mesothelioma cell line 02
GSM5912663 Malignant Pleural Mesothelioma cell line 04
Relations
BioProject PRJNA809675

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE197288_Matrix_processed_PJ1410183_PJ1410184_vf.txt.gz 274.4 Mb (ftp)(http) TXT
GSE197288_Matrix_signal_intensities_PJ1410183_PJ1410184_vf.txt.gz 263.4 Mb (ftp)(http) TXT
GSE197288_RAW.tar 432.4 Mb (http)(custom) TAR (of IDAT)
Processed data are available on Series record
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