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Platform GPL21168 Query DataSets for GPL21168
Status Public on Nov 23, 2015
Title HumanOmniExpress-24 v1.0 BeadChip [SNP_ID version]
Technology type oligonucleotide beads
Distribution commercial
Organism Homo sapiens
Manufacturer Illumina, Inc.
Manufacture protocol See manufacturer's website
 
 
Submission date Nov 23, 2015
Last update date Nov 23, 2015
Contact name GEO admin
E-mail(s) geo@ncbi.nlm.nih.gov
Organization name NCBI/NLM/NIH
Street address 9000 Rockville Pike
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Samples (301) GSM2028898, GSM2028899, GSM2028900, GSM2028901, GSM2028902, GSM2028903 
Series (14)
GSE76611 GWAS for drug response in patients with OCD
GSE78710 SNP microarray of T-REx-293-based clones overexpressing the DNA cytosine deaminase APOBEC3B
GSE82309 East Eurasian ancestry in the middle of Europe: genetic footprints of Steppe nomads in the genomes of Belarusian Lipka Tatars
Relations
Alternative to GPL19699 (IlmnID version)

Data table header descriptions
ID SNP_ID
SNP_ID NCBI SNP accession
IlmnID
IlmnStrand
SNP
AddressA_ID
AlleleA_ProbeSeq
AddressB_ID
AlleleB_ProbeSeq
GenomeBuild
Chr
MapInfo
Ploidy
Species
Source
SourceVersion
SourceStrand
SourceSeq
TopGenomicSeq
BeadSetID
Exp_Clusters
RefStrand

Data table
ID SNP_ID IlmnID IlmnStrand SNP AddressA_ID AlleleA_ProbeSeq AddressB_ID AlleleB_ProbeSeq GenomeBuild Chr MapInfo Ploidy Species Source SourceVersion SourceStrand SourceSeq TopGenomicSeq BeadSetID Exp_Clusters RefStrand
rs1000000 rs1000000 rs1000000-131_B_F_1894802339 BOT [T/C] 95775890 GACTTGGAAATTCCTGGAGGTCTTTTTCCATCCTCTCCTGCCTTCTTTAG 37 12 126890980 diploid Homo sapiens dbSNP 131 BOT TCCCAGGGTTGACTTGGAAATTCCTGGAGGTCTTTTTCCATCCTCTCCTGCCTTCTTTAG[T/C]TTATTTAAGGCTTAGTCGTTCATGGTCCCTAGGTGGCTGCCTCTGATTCAGGCACCATCA TGATGGTGCCTGAATCAGAGGCAGCCACCTAGGGACCATGAACGACTAAGCCTTAAATAA[A/G]CTAAAGAAGGCAGGAGAGGATGGAAAAAGACCTCCAGGAATTTCCAAGTCAACCCTGGGA 759 3 -
rs1000002 rs1000002 rs1000002-131_T_F_1889659641 TOP [A/G] 20798118 ACCCGCTCAGGTGGACTCAGCTTAGGAGGACTAAGCTGGCTGCTGTCCAA 37 3 183635768 diploid Homo sapiens dbSNP 131 TOP ACTCCCTTCTACCCGCTCAGGTGGACTCAGCTTAGGAGGACTAAGCTGGCTGCTGTCCAA[A/G]TGAGAACCATCAGAGCTAGTACTTGGTCTCCCGCAGACCTGGCACAGCCCTGTTCTCAAA ACTCCCTTCTACCCGCTCAGGTGGACTCAGCTTAGGAGGACTAAGCTGGCTGCTGTCCAA[A/G]TGAGAACCATCAGAGCTAGTACTTGGTCTCCCGCAGACCTGGCACAGCCCTGTTCTCAAA 783 3 -
rs10000023 rs10000023 rs10000023-131_B_F_1908645866 BOT [T/G] 84656366 GAGCACGGAATGGACAGGAGAGAGAGTTCACAGGTGGAATTGCTAGAATT 37 4 95733906 diploid Homo sapiens dbSNP 131 BOT CTGGGAGGGGGAGCACGGAATGGACAGGAGAGAGAGTTCACAGGTGGAATTGCTAGAATT[T/G]GGGGGTTAGTTGGTTTTTGAAAGTGATTTTTTTGGTTTGTCATTAGAAATTGAAAGGATA TATCCTTTCAATTTCTAATGACAAACCAAAAAAATCACTTTCAAAAACCAACTAACCCCC[A/C]AATTCTAGCAATTCCACCTGTGAACTCTCTCTCCTGTCCATTCCGTGCTCCCCCTCCCAG 708 3 +
rs1000003 rs1000003 rs1000003-131_B_R_1891325219 BOT [T/C] 57645520 TGAATTTAATGCCTTAGTCCCAAGAAGAGAGAGGTGCTTTGAGTCAGTGC 37 3 98342907 diploid Homo sapiens dbSNP 131 TOP atcagaatctgcattttaacaacagccccaggtgattcatatgcaagttactctttgaga[A/G]gcactgACTCAAAGCACCTCTCTCTTCTTGGGACTAAGGCATTAAATTCAACTGGGACAA atcagaatctgcattttaacaacagccccaggtgattcatatgcaagttactctttgaga[A/G]gcactgACTCAAAGCACCTCTCTCTTCTTGGGACTAAGGCATTAAATTCAACTGGGACAA 705 3 -
rs10000030 rs10000030 rs10000030-131_B_R_1891267789 BOT [T/C] 54698907 CTTTTTCCAAGCTATACAGATTCATAGATATTGGTATCTTTTCTTAAGCC 37 4 103374154 diploid Homo sapiens dbSNP 131 TOP TTGATATGACTGTTTCATGAGATTCTATCTGGCTCAATATGATGCAGGTTTAACTACAGC[A/G]GGCTTAAGAAAAGATACCAATATCTATGAATCTGTATAGCTTGGAAAAAGGAGAAAATGC TTGATATGACTGTTTCATGAGATTCTATCTGGCTCAATATGATGCAGGTTTAACTACAGC[A/G]GGCTTAAGAAAAGATACCAATATCTATGAATCTGTATAGCTTGGAAAAAGGAGAAAATGC 705 3 -
rs10000037 rs10000037 rs10000037-131_B_R_1891342139 BOT [T/C] 67793954 AAATAGGTCAGCACGACTGTCATCTTTTCTTCTCGTTAATAACGTTTACA 37 4 38924330 diploid Homo sapiens dbSNP 131 TOP cccagCGATACCTCCCACACCATGAATCACTTTTGTCCTGGGAAAACTGGGGACCGCTGT[A/G]TGTAAACGTTATTAACGAGAAGAAAAGATGACAGTCGTGCTGACCTATTTCTTTTTTCAG cccagCGATACCTCCCACACCATGAATCACTTTTGTCCTGGGAAAACTGGGGACCGCTGT[A/G]TGTAAACGTTATTAACGAGAAGAAAAGATGACAGTCGTGCTGACCTATTTCTTTTTTCAG 759 3 -
rs10000041 rs10000041 rs10000041-131_T_R_1893970874 TOP [A/C] 42786284 CGGGATTGCAGCTGGGAACAGGTGAACAGCAACTGGTGCAATGGGGGTGC 37 4 165621955 diploid Homo sapiens dbSNP 131 BOT CCCTGCCCCAGCGCATCCCATGCACTCTGAAGGCCCTCTTGTCCTGCAGCCACGTAGCAC[T/G]GCACCCCCATTGCACCAGTTGCTGTTCACCTGTTCCCAGCTGCAATCCCGAGGGTTGCCT AGGCAACCCTCGGGATTGCAGCTGGGAACAGGTGAACAGCAACTGGTGCAATGGGGGTGC[A/C]GTGCTACGTGGCTGCAGGACAAGAGGGCCTTCAGAGTGCATGGGATGCGCTGGGGCAGGG 772 3 -
rs10000042 rs10000042 rs10000042-131_T_R_1895028553 TOP [A/G] 65660910 TTGCCACATATTAAGACATTTCATCTTCACCAAAGCAGTAGGAGTGGCAC 37 4 5237152 diploid Homo sapiens dbSNP 131 BOT ggtaagttactcagccacactgtcctccatttcctcatgttggaaagagaatgacaatgg[T/C]gtgccactcctactgctttggtgaagatgaaatgtcttaatatgtggcaagcacttagac gtctaagtgcttgccacatattaagacatttcatcttcaccaaagcagtaggagtggcac[A/G]ccattgtcattctctttccaacatgaggaaatggaggacagtgtggctgagtaacttacc 708 3 -
rs10000049 rs10000049 rs10000049-131_T_F_1893954592 TOP [A/C] 88629420 TTTGCATTTCATCTCTCTCTCTCTGCTTGCTGTGCTTGATGTAGCCCCAA 37 4 118948220 diploid Homo sapiens dbSNP 131 TOP AATTGATGACTTTGCATTTCATCTCTCTCTCTCTGCTTGCTGTGCTTGATGTAGCCCCAA[A/C]CAAAAAAAAAAAAAAAAAACTGTTGCCCCCCTAGCATAGATAGGTATAAATAAAAAATAA AATTGATGACTTTGCATTTCATCTCTCTCTCTCTGCTTGCTGTGCTTGATGTAGCCCCAA[A/C]CAAAAAAAAAAAAAAAAAACTGTTGCCCCCCTAGCATAGATAGGTATAAATAAAAAATAA 759 3 +
rs1000007 rs1000007 rs1000007-131_T_F_1891267790 TOP [A/G] 52801922 CTGTCTGTAAGATGAAAACCTGGCCCCATGTCTGTCAAAAAATTTGGAAA 37 2 237752054 diploid Homo sapiens dbSNP 131 TOP GGGAGAATTCCTGTCTGTAAGATGAAAACCTGGCCCCATGTCTGTCAAAAAATTTGGAAA[A/G]CTTCAGCTCTTAAGGAGGATATTGGGAATTGTGGACCACGCAGACACCTCAAACTCAGCT GGGAGAATTCCTGTCTGTAAGATGAAAACCTGGCCCCATGTCTGTCAAAAAATTTGGAAA[A/G]CTTCAGCTCTTAAGGAGGATATTGGGAATTGTGGACCACGCAGACACCTCAAACTCAGCT 705 3 -
rs10000073 rs10000073 rs10000073-131_T_R_1895048370 TOP [A/G] 50797532 CAGTTCTTCCCTTTGGAGCTGAGTAAATGTACAACTAGGATGCCAAAGAG 37 4 43022222 diploid Homo sapiens dbSNP 131 BOT TTACCTGAGGTAAGACTTACTAGATGGAAGAGTATGTGGCAGTAAGGAAAAATGTCTTCT[T/C]CTCTTTGGCATCCTAGTTGTACATTTACTCAGCTCCAAAGGGAAGAACTGTGCTCAGTAT ATACTGAGCACAGTTCTTCCCTTTGGAGCTGAGTAAATGTACAACTAGGATGCCAAAGAG[A/G]AGAAGACATTTTTCCTTACTGCCACATACTCTTCCATCTAGTAAGTCTTACCTCAGGTAA 705 3 -
rs10000081 rs10000081 rs10000081-131_B_F_1895064663 BOT [T/C] 39701599 TTGTCCACTTTGGTCTTTCTCAGTTGTTTCTGACAGTCACTTAGATGGAC 37 4 17348363 diploid Homo sapiens dbSNP 131 BOT TATCTTTTCTTTGTCCACTTTGGTCTTTCTCAGTTGTTTCTGACAGTCACTTAGATGGAC[T/C]CCTTATGCCCTCTGCTACACTCTGCACACTCCTGAGGTACATGAAGGCACAGAGATCTAT ATAGATCTCTGTGCCTTCATGTACCTCAGGAGTGTGCAGAGTGTAGCAGAGGGCATAAGG[A/G]GTCCATCTAAGTGACTGTCAGAAACAACTGAGAAAGACCAAAGTGGACAAAGAAAAGATA 708 3 +
rs10000092 rs10000092 rs10000092-131_T_R_1911627639 TOP [A/G] 78627116 CAAGGTTATGCATAATGCTAATTAGGATCCTAAAGCAGGAAGTAAGGGAA 37 4 21895517 diploid Homo sapiens dbSNP 131 BOT AGTTTTGTAGTGGATTACATCTGAACTGAATTTTCAGTGCTGCTGTGTGCATATTAAATG[T/C]TTCCCTTACTTCCTGCTTTAGGATCCTAATTAGCATTATGCATAACCTTGAAAATAATCT AGATTATTTTCAAGGTTATGCATAATGCTAATTAGGATCCTAAAGCAGGAAGTAAGGGAA[A/G]CATTTAATATGCACACAGCAGCACTGAAAATTCAGTTCAGATGTAATCCACTACAAAACT 705 3 -
rs10000105 rs10000105 rs10000105-131_T_F_1893943453 TOP [A/G] 50660895 TGAGACACACATTGTGATTGTGCTTGTTTTTGAAAGACAGAGTCCAGGTC 37 4 53623677 diploid Homo sapiens dbSNP 131 TOP AGCAATTGGGTGAGACACACATTGTGATTGTGCTTGTTTTTGAAAGACAGAGTCCAGGTC[A/G]GAATCACAGGGAAGGAAATCAACTACTTCAAAATATTGAACTGGTTAGTGGGAAGCGCTC AGCAATTGGGTGAGACACACATTGTGATTGTGCTTGTTTTTGAAAGACAGAGTCCAGGTC[A/G]GAATCACAGGGAAGGAAATCAACTACTTCAAAATATTGAACTGGTTAGTGGGAAGCGCTC 783 3 +
rs10000119 rs10000119 rs10000119-131_T_R_1893947293 TOP [A/G] 61633103 GAAAATACATGTTTAATAGCTGTATGAACCAAAATGTGAGCGCCATCACC 37 4 37796830 diploid Homo sapiens dbSNP 131 BOT AGAATTCTGTGTATCTGCTCTCTTCCACTTAGTGGAAGTGGTACTTGGTCAAATACATGT[T/C]GGTGATGGCGCTCACATTTTGGTTCATACAGCTATTAAACATGTATTTTCTCTCCAACTA TAGTTGGAGAGAAAATACATGTTTAATAGCTGTATGAACCAAAATGTGAGCGCCATCACC[A/G]ACATGTATTTGACCAAGTACCACTTCCACTAAGTGGAAGAGAGCAGATACACAGAATTCT 759 3 -
rs10000124 rs10000124 rs10000124-131_B_R_1908800786 BOT [T/G] 62770967 CCAAGGAGATCCGGAAAGAACCAGAAGCTGATGGCATCCTGGAAGTAAGG 37 4 109106451 diploid Homo sapiens dbSNP 131 TOP ttatttgacccatcatcagcatttgacacagttgattacactttcttcaaacgctttctt[A/C]ccttacttccaggatgccatcagcttctggttctttccggatctccttggctcttcgtta ttatttgacccatcatcagcatttgacacagttgattacactttcttcaaacgctttctt[A/C]ccttacttccaggatgccatcagcttctggttctttccggatctccttggctcttcgtta 708 3 -
rs10000154 rs10000154 rs10000154-131_T_F_1893949661 TOP [A/G] 75725318 TGGGGAAATGTACAAGCTTGGGTATCAGGAAGACTTAGGTTTGAATTCTA 37 4 80666077 diploid Homo sapiens dbSNP 131 TOP TAAGGTATAATGGGGAAATGTACAAGCTTGGGTATCAGGAAGACTTAGGTTTGAATTCTA[A/G]CTCTGCATTGACTCAGTTACATCATTTAGAAAATAAAGAAATGTTTCCTTCTTTTCACAG TAAGGTATAATGGGGAAATGTACAAGCTTGGGTATCAGGAAGACTTAGGTTTGAATTCTA[A/G]CTCTGCATTGACTCAGTTACATCATTTAGAAAATAAAGAAATGTTTCCTTCTTTTCACAG 708 3 +
rs1000016 rs1000016 rs1000016-131_B_R_1891268428 BOT [T/C] 45733180 GGACAGGGATACAGGGAGTAGGGGCTTTGAGAAAAGTGTAACTTATTTGC 37 2 235690982 diploid Homo sapiens dbSNP 131 TOP TGTCCTCCCCTCCGTAAGCATTCTTCCTCCCTTTCTTACTCAGCCTGAATCCTGCTATTT[A/G]GCAAATAAGTTACACTTTTCTCAAAGCCCCTACTCCCTGTATCCCTGTCCTGCTATATTC TGTCCTCCCCTCCGTAAGCATTCTTCCTCCCTTTCTTACTCAGCCTGAATCCTGCTATTT[A/G]GCAAATAAGTTACACTTTTCTCAAAGCCCCTACTCCCTGTATCCCTGTCCTGCTATATTC 705 3 -
rs10000160 rs10000160 rs10000160-131_T_F_1895138379 TOP [A/G] 81609198 GGATGTTGTCACTGCTGTTTTGTGATCTAGCCTCCTCATAGCTGCTAGAG 37 4 69033099 diploid Homo sapiens dbSNP 131 TOP CTGCCACTGTGGATGTTGTCACTGCTGTTTtgtgatctagcctcctcatagctgctagag[A/G]gccaggtggtacaacctaaaactgtgtcacagtcgatgtgtcatgggaggaatttttttc CTGCCACTGTGGATGTTGTCACTGCTGTTTtgtgatctagcctcctcatagctgctagag[A/G]gccaggtggtacaacctaaaactgtgtcacagtcgatgtgtcatgggaggaatttttttc 759 3 +
rs10000169 rs10000169 rs10000169-131_T_R_1891213580 TOP [A/G] 53670281 CACCACAAAGACCTGACAATTCAAACAGTCTTACAGTTAATAACACGTAG 37 4 77356246 diploid Homo sapiens dbSNP 131 BOT TATTCTAGGAACTATTTTCTATCCCTTGGCAATTAGCCATCTGTATAGTATTTTTAACTT[T/C]CTACGTGTTATTAACTGTAAGACTGTTTGAATTGTCAGGTCTTTGTGGTGAGCTGAATTC GAATTCAGCTCACCACAAAGACCTGACAATTCAAACAGTCTTACAGTTAATAACACGTAG[A/G]AAGTTAAAAATACTATACAGATGGCTAATTGCCAAGGGATAGAAAATAGTTCCTAGAATA 708 3 -

Total number of rows: 716503

Table truncated, full table size 301597 Kbytes.




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