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Series GSE20741 Query DataSets for GSE20741
Status Public on Mar 10, 2011
Title Genome-wide analysis of mechanosensitive genes using in vivo model of mouse carotid artery endothelium exposed to disturbed flow
Organism Mus musculus
Experiment type Expression profiling by array
Summary Recently, we have shown that disturbed flow caused by partial ligation of mouse carotid artery rapidly induces endothelial dysfunction and atherosclerosis within two weeks. To understand the molecular mechanisms by which disturbed flow induces atherosclerosis, we carried out genome-wide microarray study using endothelial RNAs isolated from the flow-disturbed left and the contralateral right common carotid artery (LCA and RCA) in C57BL/6 mice.
 
Overall design Total intimal RNAs were obtained from LCA and RCA at 12hr and at 48hr post-ligation. Intimal RNAs from three LCAs or RCAs were pooled to obtain ~30ng total RNA.
 
Contributor(s) Jo H, Ni C
Citation(s) 20551377
Submission date Mar 10, 2010
Last update date Jan 16, 2019
Contact name Hanjoong Jo
E-mail(s) hanjoong.jo@bme.gatech.edu
Phone 404-712-9654
Fax 404-727-3330
Organization name Emory University
Department Biomedical Engineering
Street address 2005 WMB
City Atlanta
State/province GA
ZIP/Postal code 30068
Country USA
 
Platforms (1)
GPL6887 Illumina MouseWG-6 v2.0 expression beadchip
Samples (12)
GSM520561 LCA EC 12h rep1
GSM520562 LCA EC 12h rep2
GSM520563 LCA EC 12h rep3
Relations
BioProject PRJNA124983

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE20741_12hr_non-normalized_data.txt.gz 5.9 Mb (ftp)(http) TXT
GSE20741_48hr_non-normalized_data.txt.gz 5.8 Mb (ftp)(http) TXT
GSE20741_RAW.tar 15.8 Mb (http)(custom) TAR
Processed data included within Sample table

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