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| Status |
Public on Apr 22, 2024 |
| Title |
FOXA2/AP-1 drives prostate cancer lineage plasticity |
| Organisms |
Homo sapiens; Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
May 15, 2023 |
| Last update date |
Apr 22, 2024 |
| Contact name |
Zifeng Wang |
| E-mail(s) |
wzifeng8@gmail.com
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| Phone |
6174709887
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| Organization name |
UMASS Boston
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| Department |
CPCT
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| Lab |
Changmeng Cai
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| Street address |
100 Morrissey Blvd, ISC/4610
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| City |
Boston |
| State/province |
Massachusetts |
| ZIP/Postal code |
02125 |
| Country |
USA |
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| Platforms (3) |
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| Samples (101)
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| GSM7350175 |
NCI-H660 cells, siNC, ChIP-JUN |
| GSM7350176 |
NCI-H660 cells, vehicle, ChIP-H3K4me2 |
| GSM7350177 |
NCI-H660 cells, vehicle, ATAC |
| GSM7350178 |
LNCaP_FOXA2OE cells, vehicle, ChIP-FOXA2 |
| GSM7350179 |
LNCaP_FOXA2OE cells, vehicle, ChIP-JUN |
| GSM7350180 |
LNCaP cells, siFOXA1, ChIP-JUN |
| GSM7350181 |
LNCaP cells, siNC, ChIP-JUN |
| GSM7350182 |
PC3 cells, C12, ChIP-FOXA2 |
| GSM7350183 |
PC3 cells, ORY-1001, ChIP-FOXA2 |
| GSM7350184 |
PC3 cells, vehicle, ChIP-FOXA2 |
| GSM7350185 |
PC3 cells, siFOXA2, ChIP-FOSL1 |
| GSM7350186 |
PC3 cells, siFOXA2, ChIP-JUN |
| GSM7350187 |
PC3 cells, siNC, ChIP-FOSL1 |
| GSM7350188 |
PC3 cells, siNC, ChIP-JUN |
| GSM7350189 |
PC3 cells, vehicle, ChIP-H3K27AC |
| GSM7350190 |
PC3 cells, vehicle, ATAC |
| GSM7350191 |
PDX201.1_PDX201.2_PDX_pooled_input |
| GSM7350192 |
PDX201.1, vehicle, ChIP-AR, repeat 1 |
| GSM7350193 |
PDX201.1, vehicle, ChIP-AR, repeat 2 |
| GSM7350194 |
PDX201.1, vehicle, ChIP-FOXA1, repeat 1 |
| GSM7350195 |
PDX201.1, vehicle, ChIP-FOXA1, repeat 2 |
| GSM7350196 |
PDX201.1, vehicle, ChIP-FOXA1, repeat 3 |
| GSM7350197 |
PDX201.1, vehicle, ChIP-FOXA1, repeat 4 |
| GSM7350198 |
PDX201.1, vehicle, ChIP-H3K27Ac, repeat 1 |
| GSM7350199 |
PDX201.1, vehicle, ChIP-H3K27Ac, repeat 2 |
| GSM7350200 |
PDX201.1, vehicle, ChIP-H3K27Ac, repeat 3 |
| GSM7350201 |
PDX201.2, vehicle, ChIP-FOXA2, repeat 1 |
| GSM7350202 |
PDX201.2, vehicle, ChIP-FOXA2, repeat 2 |
| GSM7350203 |
PDX201.2, vehicle, ChIP-FOXA2, repeat 3 |
| GSM7350204 |
PDX201.2, vehicle, ChIP-FOXA2, repeat 4 |
| GSM7350205 |
PDX201.2, vehicle, ChIP-H3K27Ac, repeat 1 |
| GSM7350206 |
PDX201.2, vehicle, ChIP-H3K27Ac, repeat 2 |
| GSM7350207 |
LNCaP_CTL_cells,vehicle, repeat 1 |
| GSM7350208 |
LNCaP_CTL_cells,vehicle, repeat 2 |
| GSM7350209 |
LNCaP_CTL_cells,vehicle, repeat 3 |
| GSM7350210 |
LNCaP_FOXA2OE, vehicle, repeat 1 |
| GSM7350211 |
LNCaP_FOXA2OE, vehicle, repeat 2 |
| GSM7350212 |
LNCaP_FOXA2OE, vehicle, repeat 3 |
| GSM7350213 |
LNCaP_CTL_cells, DHT 10nM repeat 1 |
| GSM7350214 |
LNCaP_CTL_cells, DHT 10nM repeat 2 |
| GSM7350215 |
LNCaP_CTL_cells, DHT 10nM repeat 3 |
| GSM7350216 |
LNCaP_FOXA2OE_cells, DHT 10nM repeat 1 |
| GSM7350217 |
LNCaP_FOXA2OE_cells, DHT 10nM repeat 2 |
| GSM7350218 |
LNCaP_FOXA2OE_cells, DHT 10nM repeat 3 |
| GSM7350219 |
NCI-H660 cells, siFOXA2, repeat 1 |
| GSM7350220 |
NCI-H660 cells, siFOXA2, repeat 2 |
| GSM7350221 |
NCI-H660 cells, siFOXA2, repeat 3 |
| GSM7350222 |
NCI-H660 cells, siJUN, repeat 1 |
| GSM7350223 |
NCI-H660 cells, siJUN, repeat 2 |
| GSM7350224 |
NCI-H660 cells, siJUN, repeat 3 |
| GSM7350225 |
NCI-H660 cells, siNC, repeat 1 |
| GSM7350226 |
NCI-H660 cells, siNC, repeat 2 |
| GSM7350227 |
NCI-H660 cells, siNC, repeat 3 |
| GSM7350228 |
PC3 cells, C12, repeat 1 |
| GSM7350229 |
PC3 cells, C12, repeat 2 |
| GSM7350230 |
PC3 cells, C12, repeat 3 |
| GSM7350231 |
PC3 cells, ORY-1001, repeat 1 |
| GSM7350232 |
PC3 cells, ORY-1001, repeat 2 |
| GSM7350233 |
PC3 cells, ORY-1001, repeat 3 |
| GSM7350234 |
PC3 cells, vehicle, repeat 1 |
| GSM7350235 |
PC3 cells, vehicle, repeat 2 |
| GSM7350236 |
PC3 cells, vehicle, repeat 3 |
| GSM7350237 |
PC3 cells, siJUN, repeat 1 |
| GSM7350238 |
PC3 cells, siJUN, repeat 2 |
| GSM7350239 |
PC3 cells, siNC, repeat 1 |
| GSM7350240 |
PC3 cells, siNC, repeat 2 |
| GSM7350241 |
PC3 cells, siFOXA2, repeat 1 |
| GSM7350242 |
PC3 cells, siFOXA2, repeat 2 |
| GSM7350243 |
PC3 cells, siFOXA2, repeat 3 |
| GSM7350244 |
PC3 cells, siNTC, repeat 1 |
| GSM7350245 |
PC3 cells, siNTC, repeat 2 |
| GSM7350246 |
PC3 cells, siNTC, repeat 3 |
| GSM8015489 |
LNCaP_FOXA2K265R, siNC, repeat 1 |
| GSM8015490 |
LNCaP_FOXA2K265R, siNC, repeat 2 |
| GSM8015491 |
LNCaP_FOXA2K265R, siNC, repeat 3 |
| GSM8015492 |
LNCaP_FOXA2OE, siJUN, repeat 1 |
| GSM8015493 |
LNCaP_FOXA2OE, siJUN, repeat 2 |
| GSM8015494 |
LNCaP_FOXA2OE, siJUN, repeat 3 |
| GSM8015495 |
LNCaP_FOXA2OE, siNC, repeat 1 |
| GSM8015496 |
LNCaP_FOXA2OE, siNC, repeat 2 |
| GSM8015497 |
LNCaP_FOXA2OE, siNC, repeat 3 |
| GSM8015498 |
PC3 cells, siLSD1, repeat 1 |
| GSM8015499 |
PC3 cells, siLSD1, repeat 2 |
| GSM8015500 |
PC3 cells, siLSD1, repeat 3 |
| GSM8015501 |
PC3 cells, siNTC, repeat 1 set2 |
| GSM8015502 |
PC3 cells, siNTC, repeat 2 set2 |
| GSM8015503 |
PC3 cells, siNTC, repeat 3 set2 |
| GSM8015504 |
DKO cells, siFOXA2, repeat 1 |
| GSM8015505 |
DKO cells, siFOXA2, repeat 2 |
| GSM8015506 |
DKO cells, siFOXA2, repeat 3 |
| GSM8015507 |
DKO cells, siNC, repeat 1 |
| GSM8015508 |
DKO cells, siNC, repeat 2 |
| GSM8015509 |
DKO cells, siNC, repeat 3 |
| GSM8015521 |
LNCaP_FOXA2K265R cells, vehicle, ChIP-JUN |
| GSM8015522 |
PC3 cells, vehicle,ChIP-FOXA2 |
| GSM8015523 |
PC3 cells,vehicle, ChIP-FOXA2 |
| GSM8080192 |
DKO cells, vehicle,ChIP-FOXA2 |
| GSM8080193 |
DKO cells, ORY-1001, ChIP-FOXA2 |
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| This SuperSeries is composed of the following SubSeries: |
| GSE232552 |
FOXA2/AP-1 drives prostate cancer lineage plasticity [ChIP-seq] |
| GSE232553 |
FOXA2/AP-1 drives prostate cancer lineage plasticity [PDX ChIP-seq] |
| GSE232554 |
FOXA2/AP-1 drives prostate cancer lineage plasticity [RNA-seq] |
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| Relations |
| BioProject |
PRJNA972713 |
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