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Series GSE254615 Query DataSets for GSE254615
Status Public on May 15, 2024
Title The effect of TRAF6 loss on the gene expression profiles in leukemia cells II
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Although altered TRAF6 expression is observed in human acute myeloid leukemia (AML), its role in the AML pathogenesis remains elusive. In this study, we showed that the loss of TRAF6 in AML cells significantly impairs leukemic function in vitro and in vivo, indicating its functional importance in AML subsets. Loss of TRAF6 induces metabolic alterations, such as changes in glycolysis as well as impaired mitochondrial membrane potential and respiratory capacity. The restoration of growth capacity and metabolic activity in leukemic cells with TRAF6 loss, achieved through either forced expression of OGT or pharmacological inhibition of O-GlcNAcase (OGA) that removes O-GlcNAc, indicates the significant role of O-GlcNAc modification in the TRAF6-related cellular and metabolic dynamics. Our findings highlight the oncogenic function of TRAF6 in leukemia and illuminate the novel TRAF6/OGT/O-GlcNAc axis as a potential regulator of metabolic reprogramming in leukemogenesis.
 
Overall design To examine the role of TRAF6 in AML cells, we established TF-1, MOLM14 and THP-1 cells transduced with the inducible shTRAF6. In addition, Traf6fl/fl mice were crossed with R26-CreERT2 mice for inducible deletion. Traf6+/+;R26-CreERT2 and Traf6fl/fl;R26-CreERT2 lineage negative bone marrow cells from C57Bl/6 mice were transduced with retrovirus encoding MLL-AF9.
 
Contributor(s) Matsui S, Choi K, Starczynowski DT, Sakaida E, Muto T
Citation(s) 38609495
Submission date Jan 30, 2024
Last update date May 15, 2024
Contact name Kwangmin Choi
Organization name Cincinnati Children's Hospital Medical Center
Department Experimental Hematology & Cancer Biology
Street address 333 Burnet Avenue
City Cincinnati
State/province Ohio
ZIP/Postal code 45229
Country USA
 
Platforms (2)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (24)
GSM8047050 THP-1_untreated_1
GSM8047051 THP-1_untreated_2
GSM8047052 THP-1_untreated_3
This SubSeries is part of SuperSeries:
GSE254616 The effect of TRAF6 loss on the gene expression profiles in leukemia cells
Relations
BioProject PRJNA1071143

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Supplementary file Size Download File type/resource
GSE254615_all.count_DK22287.xlsx 2.8 Mb (ftp)(http) XLSX
GSE254615_all.count_DK23132.xlsx 1.4 Mb (ftp)(http) XLSX
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Processed data are available on Series record

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