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Series GSE254746 Query DataSets for GSE254746
Status Public on Apr 04, 2024
Title GigaMUGA SNP data of wild mice from Barcelona Robertsonian System (BRbS)
Platform organism Mus musculus
Sample organism Mus musculus domesticus
Experiment type Genome variation profiling by array
Summary The Barcelona Robertsonian system (BRbS) presents mice with standard karyotype (diploid number 40) but also carrying Robertsonian fusions (ehich lead to variable diploid numbers ranging from 28 to 39). To study the heterogeneity of their genetic background and possible genome divergence between them, samples from three populations were genotyped.
 
Overall design To investigate the degree of the genetic different between mice within and between populations, we genotyped 24 mice from three different populations included in the BRbS. Sample types included two standard populations (CFB and CTR) and one Robertsonian population (VDC).
 
Contributor(s) Marin-Garcia C, Ruiz-Herrera A
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Submission date Jan 31, 2024
Last update date Apr 05, 2024
Contact name Cristina Marín García
E-mail(s) Cristina.Marin.Garcia@uab.cat
Organization name Universitat Autònoma de Barcelona
Street address Plaça Cívica
City Bellaterra
State/province Barcelona
ZIP/Postal code 08193
Country Spain
 
Platforms (1)
GPL34100 GGP Mouse (GIGA-MUGA)
Samples (24)
GSM8057075 St_CFB_1026.01
GSM8057076 St_CFB_1026.02
GSM8057077 St_CFB_1026.05
Relations
BioProject PRJNA1071608

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE254746_02_gigaMUGA_NormalizedDATA.txt.gz 39.7 Mb (ftp)(http) TXT
GSE254746_RAW.tar 55.4 Mb (http)(custom) TAR (of IDAT)

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