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Series GSE258929

Query DataSets for GSE258929

Status

Public on Feb 27, 2024

Title

Histone ChIP-seq from BLaER1 (ENCSR980ZJN)

Project

ENCODE

Organism

Homo sapiens

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

H4K20me1 ChIP-Seq on BLaER1 cell line after 24 h treatment with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR980ZJN/

Citation(s)

22955616

BioProject

PRJNA63443

Submission date

Feb 25, 2024

Last update date

Mar 13, 2024

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL11154

Illumina HiSeq 2000 (Homo sapiens)

Samples (2)

GSM8110724	Histone ChIP-seq from BLaER1 (ENCLB223COR)
GSM8110725	Histone ChIP-seq from BLaER1 (ENCLB901EKN)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE258929_ENCFF319GAH_replicated_peaks_GRCh38.bigBed	1.9 Mb	(ftp)(http)	BIGBED
GSE258929_ENCFF352BZX_signal_p-value_GRCh38.bigWig	1.5 Gb	(ftp)(http)	BIGWIG
GSE258929_ENCFF434AKM_peaks_GRCh38.bed.gz	147.7 Kb	(ftp)(http)	BED
GSE258929_ENCFF508GAV_replicated_peaks_GRCh38.bed.gz	1.1 Mb	(ftp)(http)	BED
GSE258929_ENCFF877CRP_pseudoreplicated_peaks_GRCh38.bigBed	2.1 Mb	(ftp)(http)	BIGBED
GSE258929_ENCFF939SHE_pseudoreplicated_peaks_GRCh38.bed.gz	1.2 Mb	(ftp)(http)	BED
GSE258929_ENCFF939ZOR_peaks_GRCh38.bigBed	366.1 Kb	(ftp)(http)	BIGBED
GSE258929_ENCFF993SKJ_fold_change_over_control_GRCh38.bigWig	1.8 Gb	(ftp)(http)	BIGWIG
GSE258929_RAW.tar	9.5 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA