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Series GSE38101 Query DataSets for GSE38101
Status Public on Jul 28, 2013
Title USP49 deubiquitinates histone H2B and regulates pre-mRNA splicing
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 23824326
Submission date May 21, 2012
Last update date May 15, 2019
Contact name Hengbin Wang
Organization name Virginia Commonwealth University
Department Massey Cancer Institute
Street address 401 College Street
City Richmond
State/province VA
ZIP/Postal code 23298
Country USA
 
Platforms (2)
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
GPL15433 Illumina HiSeq 1000 (Homo sapiens)
Samples (10)
GSM934590 uH2B ChIP-Seq Control
GSM934591 uH2b ChIP-Seq USP49 knockdown
GSM934592 H2B ChIP-Seq Control
This SuperSeries is composed of the following SubSeries:
GSE38099 Examination of histone H2B ubiquitination in wild type and USP49 knockdown cells [ChIP-Seq]
GSE38100 Examination of gene expression in wild type and USP49 knockdown cells [RNA-Seq]
Relations
BioProject PRJNA167205

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE38101_RAW.tar 2.6 Gb (http)(custom) TAR (of BEDGRAPH, GTF)
SRA Run SelectorHelp

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