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Series GSE44635 Query DataSets for GSE44635
Status Public on Feb 26, 2013
Title High-throughput RNA sequencing analysis of WT, rdm16-2 and sta1 mutants
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary Using Illumina paired-end RNA-seq technology to examine the genome-wide gene expression and intron-retention events in WT, rdm16-2 and sta1
 
Overall design RNA-seq analysis of 4-week-old leaves of WT, rdm16-2 and sta1 mutants
 
Contributor(s) Huang C, Yang L, Zhu J
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Submission date Feb 25, 2013
Last update date May 15, 2019
Contact name Lan Yang
E-mail(s) yanglbio@gmail.com
Organization name Institute of Plant Physiol & Ecology, Chinese Academy of Sciences
Street address 300 Fenglin Road
City Shanghai
ZIP/Postal code 200032
Country China
 
Platforms (1)
GPL13222 Illumina HiSeq 2000 (Arabidopsis thaliana)
Samples (3)
GSM1088166 Col RNA-seq
GSM1088167 rdm16-2 RNA-seq
GSM1088168 sta1 RNA-seq
Relations
BioProject PRJNA190679
SRA SRP018842

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE44635_RAW.tar 297.8 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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