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Series GSE48848 Query DataSets for GSE48848
Status Public on Aug 09, 2013
Title KBM7 genetrap mutant cells stimulated with TNF-alpha and IFN-gamma
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Transcriptional response of KBM7 cells to IFN-gamma or TNF-alpha was investigated in control or cells with genetrap insertions in JAK2 or TNFRS1A, respectively. The experiment shows that, as expected, cells lacking JAK2 or TNFRS1A expression display a severly blunted response to the tested cytokines.
 
Overall design KBM7 genetrap mutant cells stimulated with TNF-alpha and IFN-gamma
Sample WT_1 corresponds with the control sample for the IFN-gamma stimulation; Sample WT_2 corresponds with the control sample for the TNF-alpha stimulation.
As the expected differences between the samples was large, only single replicates were performed for each condition
 
Contributor(s) Nijman S, Buerckstuemmer T
Citation(s) 24161985
Submission date Jul 13, 2013
Last update date Aug 23, 2018
Contact name Sebastian M Nijman
E-mail(s) snijman@cemm.oeaw.ac.at
Organization name Research Center for Molecular Medicine
Lab Nijman
Street address Lazarettgasse 14
City Vienna
ZIP/Postal code 1090
Country Austria
 
Platforms (1)
GPL15207 [PrimeView] Affymetrix Human Gene Expression Array
Samples (8)
GSM1185624 Wild type control_1
GSM1185625 Wild type control_1 +IFN-gamma
GSM1185626 JAK2 mutant
Relations
BioProject PRJNA211962

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE48848_RAW.tar 16.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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