NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE53645 Query DataSets for GSE53645
Status Public on Mar 28, 2016
Title Expression data in human esophageal squamous carcinoma cell line KYSE150 with LOXL2 delta 72 over-expression
Organism Homo sapiens
Experiment type Expression profiling by array
Summary We have identified a new novel spliced variant of Lysyl Oxidase-like 2 (LOXL2), termed LOXL2 delta72, in human oesophageal carcinoma cells (ESCC). To explore the biological function of this variant, the cDNA microarrays was perform to assess the genes expression induced by its over-expression in ESCC KYSE150.
We used microarrays to detail the global programmed of genes expression when LOXL2 delta72 over-expressed in KYSE150 cells compared with wild-type LOXL2.
 
Overall design KYSE 150 cells were transfected with vector, pcDNA3.1 LOXL2 WT or pcDNA3.1 LOXL2 delta72, respectively. After 48 hours transfection, RNA extractions were carried out, and the expressions of LOXL2 were examined by RT-PCR. The samples were sent to perfor hybridization on Affymetrix microarrays.
 
Contributor(s) Zou H, Lv G
Citation(s) 24716982, 25254241
Submission date Dec 24, 2013
Last update date Jun 21, 2019
Contact name Haiying Zou
E-mail(s) zouhaiying73@163.com
Organization name Shantou University Medical College
Department Department of Biochemistry and Molecular Biology
Street address 22 Xinling Road
City Shantou
State/province Guangdong
ZIP/Postal code 515041
Country China
 
Platforms (1)
GPL15207 [PrimeView] Affymetrix Human Gene Expression Array
Samples (3)
GSM1298070 Control
GSM1298071 LOXL2 WT
GSM1298072 LOXL2 delta 72
Relations
BioProject PRJNA232544

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE53645_RAW.tar 5.9 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap