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| Status |
Public on Oct 12, 2015 |
| Title |
Androgen receptor programming in human tissue implicates HOXB13 in prostate pathogenesis [ChIP-Seq] |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
The androgen receptor (AR), a nuclear transcription factor (TF), is consistently reprogrammed during prostate tumorigenesis
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| Overall design |
Mapping AR binding sites in patient prostate tumor and normal tissues
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| Contributor(s) |
Pomerantz MM, Li F, Takeda D, Chonkar A, Chabot M, Li Q, Cejas P, Vazquez F, Shivdasani RA, Seo J, Bowden M, Lis R, Hahn WC, Kantoff PW, Brown M, Loda M, Long HW, Freedman ML |
| Citation(s) |
26457646 |
| Submission date |
Mar 27, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Fugen Li |
| E-mail(s) |
fugen_li@dfci.harvard.edu
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| Organization name |
Dana-Farber Cancer Institute
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| Street address |
450 Brookline Ave
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| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02215 |
| Country |
USA |
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| Platforms (3) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
| GPL15520 |
Illumina MiSeq (Homo sapiens) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
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| Samples (29)
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| This SubSeries is part of SuperSeries: |
| GSE70079 |
Androgen receptor programming in human tissue implicates HOXB13 in prostate pathogenesis |
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| Relations |
| BioProject |
PRJNA242853 |
| SRA |
SRP040649 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE56288_RAW.tar |
5.9 Gb |
(http)(custom) |
TAR (of BED, BW, TXT) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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