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Series GSE56388 Query DataSets for GSE56388
Status Public on Jan 06, 2015
Title MethylC-Seq of ago6-2, ago4-6 and ago4-6 ago6-2 double mutants
Organism Arabidopsis thaliana
Experiment type Methylation profiling by high throughput sequencing
Summary Using MethylC-Seq to provide single-base resolution of DNA methylation status in ago6-2, ago4-6 and ago4-6 ago6-2 double mutants
 
Overall design MethylC-Seq: 3 mutants examined, ago6-2, ago4-6 single mutant and ago4-6 ago6-2 double mutants
 
Contributor(s) Duan C, Zhang H, Tang K, Zhu J
Citation(s) 25527293
Submission date Mar 31, 2014
Last update date May 15, 2019
Contact name Jian-Kang Zhu
E-mail(s) zhu132@purdue.edu
Organization name Purdue University
Department Department of Horticulture and Landscape Architecture
Street address 625 Agriculture Mall Dr.
City West Lafayette
State/province IN
ZIP/Postal code 47907
Country USA
 
Platforms (1)
GPL13222 Illumina HiSeq 2000 (Arabidopsis thaliana)
Samples (3)
GSM1360160 ago4-6_MethylC-Seq
GSM1360161 ago6-2_MethylC-Seq
GSM1360162 double_MethylC-Seq
Relations
BioProject PRJNA243092
SRA SRP040746

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE56388_RAW.tar 300.0 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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