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| Status |
Public on Mar 02, 2015 |
| Title |
The splicing factor PRP31 is involved in transcriptional gene silencing and stress response in Arabidopsis |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
To study how PRP31, ZOP1 and STA1 affect gene expression and pre-mRNA splicing, we performed RNA deep sequencing for the seedlings materials C24, prp31, zop1, and sta1 mutants.
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| Overall design |
Compare the mRNA profiles of 10-day old seedlings materials of mutants (prp31, zop1 and sta1) to wild type C24 by Illumina suquencing.
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| Contributor(s) |
He X, Du J, Huang H |
| Citation(s) |
25684655 |
| Submission date |
Dec 02, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
huanwei huang |
| E-mail(s) |
hhw2436@gmail.com
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| Organization name |
NIBS
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| Street address |
7 Science Park Rd., ZGC life science park
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| City |
Beijing |
| ZIP/Postal code |
102206 |
| Country |
China |
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| Platforms (1) |
| GPL13222 |
Illumina HiSeq 2000 (Arabidopsis thaliana) |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA269009 |
| SRA |
SRP050410 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE63757_Expression_FPKM.txt.gz |
480.7 Kb |
(ftp)(http) |
TXT |
SRA Run Selector |
| Processed data are available on Series record |
| Raw data are available in SRA |
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