|
| Status |
Public on Dec 31, 2023 |
| Title |
Genome-wide mapping of uncapped and cleaved transcripts (GMUCT) and transcriptome of DCLs |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Absence of miRNA in dcl1 mutant activates global translation-independent 5’->3’ exonucleolytic decay to maintain robust mRNA abundance of miRNA target genes.
|
| |
|
| Overall design |
polyA-selected RNA-seq, and polyA-selected global mapping of uncapped transcripts (GMUCT) in Arabidopsis thaliana.
|
| |
|
| Contributor(s) |
Yu X, Vandivier LE, Gregory BD |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Aug 06, 2015 |
| Last update date |
Dec 31, 2023 |
| Contact name |
Xiang Yu |
| E-mail(s) |
yuxiang2021@sjtu.edu.cn
|
| Organization name |
Shanghai Jiao Tong University
|
| Street address |
800 DongChuan
|
| City |
Shanghai |
| State/province |
Shanghai |
| ZIP/Postal code |
200240 |
| Country |
China |
| |
|
| Platforms (1) |
| GPL13222 |
Illumina HiSeq 2000 (Arabidopsis thaliana) |
|
| Samples (3) |
|
| Relations |
| BioProject |
PRJNA292107 |
| SRA |
SRP062127 |
