|
| Status |
Public on Oct 28, 2016 |
| Title |
An interaction with Ewing's sarcoma breakpoint protein EWS defines the subset of ETS factors rearranged in prostate cancer |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
ERG activates prostate cancer specific gene expression program by recruiting RNA binding protein EWS to ETS-AP1 and GGAA microsatellite enhancers
|
| |
|
| Overall design |
ChIP-Seq of transcription factor ERG and its co-activator EWS
|
| |
|
| Contributor(s) |
Kedage V, Selvaraj N, Budka JA, Jerde TJ, Hollenhorst PC |
| Citation(s) |
27783944 |
| Submission date |
Sep 30, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Vivekananda Kedage |
| E-mail(s) |
vkedage@indiana.edu
|
| Organization name |
Indiana University
|
| Street address |
1001 E. third Street
|
| City |
Bloomington |
| State/province |
IN |
| ZIP/Postal code |
47405 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
|
| Samples (10)
|
|
| Relations |
| BioProject |
PRJNA297431 |
| SRA |
SRP064349 |
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