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Series GSE75231 Query DataSets for GSE75231
Status Public on Feb 20, 2016
Title Genome-Wide Chromatin Landscape Transitions Identify Novel Pathways in Early Commitment to Osteoblast Differentiation (Dnase-Seq)
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary DHS enahncers to identify novel pathways in OB differentiation
 
Overall design We examined DHS identified enhancers and promoters during OB differentiation
 
Contributor(s) Varticovski L, Baek S, Thompson B, Hager GL
Citation(s) 26890492
Submission date Nov 20, 2015
Last update date May 15, 2019
Contact name Songjoon Baek
Organization name NCI / NIH
Department CCR
Lab LRBGE
Street address 41 Library Drive
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (10)
GSM1946433 B34 rep#1 DNase-seq
GSM1946434 B34 rep#2 DNase-seq
GSM1946435 B39-d1 rep#1 DNase-seq
This SubSeries is part of SuperSeries:
GSE75232 Genome-Wide Chromatin Landscape Transitions Identify Novel Pathways in Early Commitment to Osteoblast Differentiation
Relations
BioProject PRJNA302853
SRA SRP066468

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE75231_RAW.tar 724.8 Mb (http)(custom) TAR (of BEDGRAPH)
GSE75231_hs_RC_B34_NA_RC_GH1029x2xGH1030_FDR0.csv.gz 1.4 Mb (ftp)(http) CSV
GSE75231_hs_RC_B39_24_RC_GH682xGH1031x2_FDR0.csv.gz 1.1 Mb (ftp)(http) CSV
GSE75231_hs_RC_B39_48_RC_GH864xGH1027x2_FDR0.csv.gz 1.4 Mb (ftp)(http) CSV
GSE75231_hs_RC_OIM48_RC_GH1034xGH1035_FDR0.csv.gz 1.7 Mb (ftp)(http) CSV
GSE75231_hs_RC_OIM_24_RC_GH1032x2xGH1033_FDR0.csv.gz 1.3 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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